Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1940 |
Symbol | |
ID | 4846061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1934384 |
End bp | 1934971 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640116646 |
Product | membrane-flanked domain-containing protein |
Protein accession | YP_001047848 |
Protein GI | 126179883 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCA CCACCTTCCG CATCGGGGAA GCGTTCAGAC CGGTGCCGCA GTTCCGGTCG TACCTCTACG CGTCCCTGAT CCTGGCCGTC GTCGTCTTCG TCCTGCCGTG GCTCGCTCCC ATCGTCATCT TCAGCCGGCT GCCCGTCGCT CTCGCCTTCG CCGTCCCGGT GCTCGCCATC GTCGTCTTCA TCGCCTACTG GATCCCGCTC TACCACGAGA GCATCGTCTA CCGGCTCACC GTCACCGAGG TGACCTGGCG GCGCGGGGTC TGGTTCCGGC AGACGGGGAT CGTCCCTTAC AACCGGATCA CGAACGTCGA TATCGTCCAG GGCCCCCTGA TGCGGTTCTT CTCCTTCTCG GCGGTCCGGG TGCAGACCGC CGGCTACTCC GCCCAGGCAC AGGCGGAGAT CGTCCTCAAC GGGATAGCGG ACCCGAAGGA TCTCCAGGAG ACGATCATGA ACTTCGTGCG GACGACCGGG CCGGTCGCCG CGACCGGGGG CGAGCCGGCA GAGGGGCCGG CAGCCGATGC CGTGGTTGAG GAACTGCGGG CGATACGGCG GCTGCTGGAG AGCCGGCAGG AGCGGTAG
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Protein sequence | MSLTTFRIGE AFRPVPQFRS YLYASLILAV VVFVLPWLAP IVIFSRLPVA LAFAVPVLAI VVFIAYWIPL YHESIVYRLT VTEVTWRRGV WFRQTGIVPY NRITNVDIVQ GPLMRFFSFS AVRVQTAGYS AQAQAEIVLN GIADPKDLQE TIMNFVRTTG PVAATGGEPA EGPAADAVVE ELRAIRRLLE SRQER
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