| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1901 |
|---|
| Symbol | |
|---|
| ID | 4847090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1896620 |
|---|
| End bp | 1897744 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640116607 |
|---|
| Product | acetylornithine and succinylornithine aminotransferases |
|---|
| Protein accession | YP_001047809 |
|---|
| Protein GI | 126179844 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAG ATTCACGCGT GCTTGATGCA CGCTACTACA TGCCCGCGTT TAGCCGGACG
ATGAAGATCG TCCGCGGCGC GGGGTCGCGT GTCTGGGACG ACCGGGGACG GGAGTATATC
GACTGCGTGG CAGGTATTGC GGTCTGCAGC ACCGGCCACT GCCACCCGAA GGTCGTCGAG
GCAATCTGCG GCCAGGCAAA AGAGTTGATC CACTGCTCGA ACCTCTACTA CATCCCGAAT
CAGGCGGAGC TCGCGGAGAA ACTCGTAGGA ATCACGGGGC TTTCGAAAGC CTTCTTCTCG
AACTCCGGCG CGGAGGCAAA CGACGGTGCG ATGAAACTCG CCCGCGTCCG GACGGGGAGA
AAGAAGTTCG CCGCGTTCGC TCACGGGTTC CACGGCCGGA CGTGCGGGTC GCTCGCTGTC
ACCCACAAGC CCGCCATAAG GGAGCCGTTC GAGCCGCTCT CGACCCCCTG CACCTTCGTC
GACTACGGCG ACCTGGACGG CCTCGCGGCG GTCGTCGATA AGGATACCGC CGGGGTCTTC
GTCGAGCCGA TCCAGGGCGA AGCGGGTGTG ATAATCCCTC CCGATGAGTT CCTCCGCGGG
GTCCGGGAGA TCTGCGACGA TGCCGGCGCG CTGATGATCG TCGACGAGGT GCAGACCGGG
ATGGGCCGGA CCGGGAAATG GTTCGCCTTC CAGCACTCCG GGGTGACCCC CGACATCGTC
ACGATCGCAA AAGGGCTTGC GAGCGGATTT CCGATCGGCG CGCTCGTCGC CCGCGAGGGG
CTCGAGTTCA AGAAGAGCGA GCACGGAAGC ACCTTTGCCG GAGGGCCGCT CGCCTGCGCG
ACGGCGCTCG CGACGATCGG CGTCATCGAG GAGATCCTCC CCGATGTCGC GTGGAAGGGC
GAACGGTTCA TGAAGGGGCT TGCCGCCCAC AATCCCCGGG GCCGCGGCCT GATGATCGGC
ATGTCGGTCG GCGACCGGTG CCCGGAGGTG CAGCAGACCT GCGCCGAGAA TGCGGTGCTC
GTCAACTGCG CAGCCGACGG GAACCTCCGG CTGATTCCGC CGCTCGTGAT CACGGACGAG
GAGATCGACA CGGCTGTCGG TGTCATCAAT GCGGCGCTTG GTTAG
|
|---|
| Protein sequence | MAEDSRVLDA RYYMPAFSRT MKIVRGAGSR VWDDRGREYI DCVAGIAVCS TGHCHPKVVE
AICGQAKELI HCSNLYYIPN QAELAEKLVG ITGLSKAFFS NSGAEANDGA MKLARVRTGR
KKFAAFAHGF HGRTCGSLAV THKPAIREPF EPLSTPCTFV DYGDLDGLAA VVDKDTAGVF
VEPIQGEAGV IIPPDEFLRG VREICDDAGA LMIVDEVQTG MGRTGKWFAF QHSGVTPDIV
TIAKGLASGF PIGALVAREG LEFKKSEHGS TFAGGPLACA TALATIGVIE EILPDVAWKG
ERFMKGLAAH NPRGRGLMIG MSVGDRCPEV QQTCAENAVL VNCAADGNLR LIPPLVITDE
EIDTAVGVIN AALG
|
|---|
| |