Gene Memar_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1857 
Symbol 
ID4847209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1851652 
End bp1852101 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID640116563 
Producthypothetical protein 
Protein accessionYP_001047765 
Protein GI126179800 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACT CGGAAGGACA GGTCGGCAGG GTCTTCACCG TCCGGATCGA CGACGGGGAG 
GACTTTCTTC GGGAGATCCA GCGGTTCGTC ACGGCGATGA ACATCAGGTG CGGCACGATC
CAGTTCCTCG GCGCCGTCCG GTCGGCAACG ATCGTGACGG GGCCGAAAGA GCCGGTCATC
CCGCCGGCAC CGCGGGGCGA AGAGATATTC GGGGGCTGGG AACTCGTCGG GTTCGCGACC
ATCTACCCCG GGGAGGACGG GCCGTCCATC CACCTCCATA CGGCGGCAGG GAAGGGGATA
CGGTCGCTTG CCGGGTGCCT CCGGGAGAAG GCGGAGGTCT ACCTGGTGAT CGAAGCGATC
GTCACGGAGT TCGTCGGCAT CACCGCAAAA CGGCTCCCCG ACGAGAAGAC CGGCGTCAAC
CTCCCGGTCT TCGACCGGAC GCTCCCATGA
 
Protein sequence
MQYSEGQVGR VFTVRIDDGE DFLREIQRFV TAMNIRCGTI QFLGAVRSAT IVTGPKEPVI 
PPAPRGEEIF GGWELVGFAT IYPGEDGPSI HLHTAAGKGI RSLAGCLREK AEVYLVIEAI
VTEFVGITAK RLPDEKTGVN LPVFDRTLP