| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1829 |
|---|
| Symbol | |
|---|
| ID | 4847852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1816907 |
|---|
| End bp | 1818670 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640116529 |
|---|
| Product | molydopterin dinucleotide-binding region |
|---|
| Protein accession | YP_001047737 |
|---|
| Protein GI | 126179772 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1029] Formylmethanofuran dehydrogenase subunit B
[COG1153] Formylmethanofuran dehydrogenase subunit D |
|---|
| TIGRFAM ID | [TIGR03129] formylmethanofuran dehydrogenase subunit B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTTC TCATCACGAG CGGGAGGACA ATCGCCCAGG GCAGGCAACT CTACTACAAA
GACATGCCCG GATATTCCTA TGAAACGGCA CGCTGTTTCG TCAACCCGTT CGATCTCCTG
GAACTCGGGG CCTCGGCAGG AGACTATCTT CTTCTCTCGA CCGGGACAGG AGAAGAGGTG
TTTGTCGCCA CACCCTGCGA CGATCTCGTC TCCGGAACCG TATTCATCCC CTGCGGACCG
CACGCGAACG CAATCCTGCA CGCGACCACG CGGGGAACCG GTGCTCCGGA CTACAAATGG
CTGGAAGGGA CGGTGACGCG AACCGATCTC TCCCCACGAT CAGGCTGGGC GATCCTCATC
GAGGAAGGCG GCGGCGCATG CCCTCCGGTG CCGGTGCCCT GCGGGGAAGA CGGCGGCGGT
CCCGTAACCA TCCGCGATGT TGCCTGCCCT CTCTGCGGGT GCCTCTGCGA CGACCTGGTC
GTGAAGGTCG AGGGCGGGGC GGTCACGTCG GTCGATAACG CATGCTCGCT CGGCTCGGAG
AAGTTCCTGT CGCAGAGCCG CCTCAGATCG CCAATCCTGA GGGATGATAA CCAGTCATGG
AGCCCGATCG GGTTCGCGGA GGGTATCCGG TATGCCGCAG AAATGCTCGC CGACGCCGAA
CGGCCACTCC TCTTTGGATG GAGCGGGACG TCCGCGGAAG CGCAGTGCAT CGGCATCCAG
ATCGCCGAGA CGATCGGGGG CGTGATCGAC AACTGTTCGT CGATCTGTCA CGGCCCCTCG
ATCATGGGCA TCCAGGAGGC GGGCCACCCG GGGTGCACGC TCGGTGCGGT GAAGAACCGG
GCCGACGTCG TGATCTACTG GGGCTCGAAC CCCATAGAGT CGCACCCGCG CCACCTCTCC
CGGTATACGA CGTTCGTCAA CGGGAAGTAC CGGGAGAACG GGCATCACGA CCGGACTCTC
GTCGTCGTGG ACATCAGGAT GACCGATACC GCAAAGATTG CCGACGAGTT CATACGGATC
AAGCCGGGTG GGGATTACGC CGTTTTTTCA GCCCTGCGGG CAATCATCAG GGGCCACGCG
GATACCCTTC CTGCAAGCAT CGGAGGGGTC CCGCGGGAGA GGCTGATCTG GCTGGCGGAC
CTCTGCAGGA ACGCCCGGTT CGGCGCGCTC TTCACAGGGA TCGGCCTGAC GCAGTCTCGG
GGCAGGTACA AAAACGTCAG GAACGCCATC CAGCTCGTCG ATGAACTCAA CCGGCATACG
AAGTTCACCC TGACACCCAT GCGCGGGCAC TGGAACGTCA ACGGCACCAA CCAGACGTTT
TCATTCCTCA CGGGCTACCC GTACGGCGTC GATTTTTCGC GCGGCACTCC GTATTACAAC
CCCGGCGAGA CGACGGCGGT CGACCTGCTC GGCCGGGGAG AGGCCGATGC ATGCCTCATC
ATCGGCGCCG ATCCGGGGGC TCATCTGCCG AGGAGGTGCA ACGAACACCT CGCGACGATC
CCGACCATCG TCATCGATCC ATTCGTCTCG CTCAGCACCT CCTTTGCGGA TATCCATATC
CCGGTCGCAT GCGTGGGCAT CGACTGCGAG GGAACGGGTT ACAGGATGGA TTCCGTCCCG
ATCCGGATGA AGAAGGTTCT CTCCTCGGGT CTCCCGACCG ACGAGGAGGT GCTGTCGCAG
ATACTCCACC TGATACAAGG ACGCCGGCCT TACGGTGTAA ACGTCCCAAA GGCACTATCC
CCGGAGGCAC CGCCGGTAGC ATGA
|
|---|
| Protein sequence | MHVLITSGRT IAQGRQLYYK DMPGYSYETA RCFVNPFDLL ELGASAGDYL LLSTGTGEEV
FVATPCDDLV SGTVFIPCGP HANAILHATT RGTGAPDYKW LEGTVTRTDL SPRSGWAILI
EEGGGACPPV PVPCGEDGGG PVTIRDVACP LCGCLCDDLV VKVEGGAVTS VDNACSLGSE
KFLSQSRLRS PILRDDNQSW SPIGFAEGIR YAAEMLADAE RPLLFGWSGT SAEAQCIGIQ
IAETIGGVID NCSSICHGPS IMGIQEAGHP GCTLGAVKNR ADVVIYWGSN PIESHPRHLS
RYTTFVNGKY RENGHHDRTL VVVDIRMTDT AKIADEFIRI KPGGDYAVFS ALRAIIRGHA
DTLPASIGGV PRERLIWLAD LCRNARFGAL FTGIGLTQSR GRYKNVRNAI QLVDELNRHT
KFTLTPMRGH WNVNGTNQTF SFLTGYPYGV DFSRGTPYYN PGETTAVDLL GRGEADACLI
IGADPGAHLP RRCNEHLATI PTIVIDPFVS LSTSFADIHI PVACVGIDCE GTGYRMDSVP
IRMKKVLSSG LPTDEEVLSQ ILHLIQGRRP YGVNVPKALS PEAPPVA
|
|---|
| |