Gene Memar_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1793 
Symbol 
ID4847250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp1786002 
End bp1786643 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID640116491 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_001047701 
Protein GI126179736 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0804701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTCT TAGTTCGTAC GAAAAGAAAG ATCTCGGGGC TATTGAAGGT GCTCTTTAAG 
AAGCGGACCT GCCGCATCGG GATCTACGGC CCTCCCAATG CCGGCAAGAC AACGCTTGCG 
AACCGGATTG TGCGGGATTG GGTCGGCGAT GCGGTCGGCC CGGTCAGTGA GGTGCCTCAC 
GAAACCCGGC GTGTCCGGCG CAAAGAGGAT ATCACCATCA CGGGCCAGAA CGGCAGTTCG 
ATCACCATCG ACATCGTCGA TACGCCGGGC GTGACGACCA AGATCGACTA CAATGAGTTC 
GTCGAGTACG GCATCGATAA GGAGGAAGCG GTCAAGCGGG CACGGGAGGC GACCGAGGGT 
GTTGCCGAGG CGATGCACTG GCTCCGCGAG GATATCGATG GCGTCATCTA CATGCTCGAC 
TCCACGCTGG ACCCGTTCCA GCAGGTGAAC ATCATGCTTG TCGGTATCAT CGAGAGCCGG 
AAACTCCCGG TCCTGATCGT TGCAAACAAA AACGATCTTC CCGACGCGTC TCCCGCGCGG 
ATCAAGAGTG CGTTTCCCCA GCACCCCGTG ATTGCCATAT CCGGTCTCGA AGGAAACAAC 
GTGGAAGAGT TATACGAGCA GATGACGTCA TATTTCGGGT GA
 
Protein sequence
MTFLVRTKRK ISGLLKVLFK KRTCRIGIYG PPNAGKTTLA NRIVRDWVGD AVGPVSEVPH 
ETRRVRRKED ITITGQNGSS ITIDIVDTPG VTTKIDYNEF VEYGIDKEEA VKRAREATEG 
VAEAMHWLRE DIDGVIYMLD STLDPFQQVN IMLVGIIESR KLPVLIVANK NDLPDASPAR 
IKSAFPQHPV IAISGLEGNN VEELYEQMTS YFG