Gene Memar_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1596 
Symbol 
ID4846689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1599790 
End bp1600950 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content51% 
IMG OID640116289 
Productglycosyl transferase, group 1 
Protein accessionYP_001047507 
Protein GI126179542 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTCT CAGACCATTA CCTCACGTTT GTCAAGGACC CGGTGGAGTT GCTCGCGGGG 
AGGTTTATGC ATACTGATGT GTATGTCAGG TACCACCCGG CAACCGAGAT CTCCAGGGTA
TTTCCGGTTC CTCGCCTCAA AGCGTTCCGG AAGGATACTC TTATTGATCG AATGAATCTG
CCCGAGAACG TGTTTGTCTA TCCTATACCT CTCTTCTATC TCCCTTGCGA CCATCAGTTC
AAAAGGATTG GAGAGCGTTA TTATGGCACT ATCGAAAATC GACTCCAGGA GTCCAAAGCA
CATCCTGACA TCATTCATGC GCATTTTGTC TGGCCGAACG GTTTTGTAGG TGCGAAGTTG
AAGGGGGAGT GTGGGATCCC ATTCGTTGTC ACCGCGCATG GGTACGATAT CTATGATCTG
CCATTCCGGG ATGCAGAGTG GAAAGAGCGA ATCGAAGCGA TTCTCAACGC TGCTGAGGTC
GTTATTACCG TCAGCAACAG CAACCGAGAA TGCATAAAGA AGCTGGACGT GACCACCCCG
GTTGAAGTTA TTCCGAATGG CTTCAGGCAC GATCAATTCC GCCCGATGCA GATGGAGATG
TGCAGAAGAT CCCTCGGCCT CCCTGTGGAA CGAAAGATAA TTCTCAGCGT TGGAAATCTG
GTGGATGTCA AGGGCCACAC GTACCTGATC GATGCAATGT CTGAAGTCGT CCGAAAGAGG
AAGGATGTTC TCTGTCTTAT TGTCGGCAGG GGCGAATTGA AGCACAGGTT AGAAAAGAAA
GTATCGTCGT TGGGCCTTGA ACAATACGTG CGCCTTGTCG GAGGTAAACC ACATAACGAG
ATCCCATTAT GGATGAACGC GTCGGATATC TTCGTTCTGC CGAGCCTGAG AGAAAGTTTC
GGAGTTGTGC AGATAGAGGC GATGGCCTGT GGGAAACCCG TTGTTGCCAC GAGAAATGGC
GGGAGTGAGG AGATCGTAAC TCCGGATGAT ACCGGTCTGC TCTGTGCTGC TGAAGATCCA
CGGAGTCTTG CGGAAAGTAT CGTCAGAGCG CTCGACATGC CGTGGGATGC CGAGGCGATT
ACAAATGGCA CTGGGTTCTA TTCGTGGGAG GCAGTCGGAA ACAAGTTTTT ACAGATCTAC
AGCAGTGTCA TTAAACATTA G
 
Protein sequence
MVLSDHYLTF VKDPVELLAG RFMHTDVYVR YHPATEISRV FPVPRLKAFR KDTLIDRMNL 
PENVFVYPIP LFYLPCDHQF KRIGERYYGT IENRLQESKA HPDIIHAHFV WPNGFVGAKL
KGECGIPFVV TAHGYDIYDL PFRDAEWKER IEAILNAAEV VITVSNSNRE CIKKLDVTTP
VEVIPNGFRH DQFRPMQMEM CRRSLGLPVE RKIILSVGNL VDVKGHTYLI DAMSEVVRKR
KDVLCLIVGR GELKHRLEKK VSSLGLEQYV RLVGGKPHNE IPLWMNASDI FVLPSLRESF
GVVQIEAMAC GKPVVATRNG GSEEIVTPDD TGLLCAAEDP RSLAESIVRA LDMPWDAEAI
TNGTGFYSWE AVGNKFLQIY SSVIKH