Gene Memar_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1562 
Symbol 
ID4846287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1568117 
End bp1568569 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content58% 
IMG OID640116255 
Productsmall heat shock protein (HSP20-1) 
Protein accessionYP_001047473 
Protein GI126179508 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA GTCCAGCAGA CATCTTCGAG CAACTCAACG AACTGATGAA ACGCCTCATG 
GAGCAGGGGC TCAAAGAGCA GGGAGATCAG AACAGACCGT TTGCCTACGG ATTCAAGATC
GTTCTTCACG ACGCCGGAAT GCCTGAGATC CCGGCAACGG AAGCCGCTCC CGTAGCAGAG
CCGAAAGAAC CCTCTTCCGA GGGGACCATC GAGCCGATAG CAGAGATGTA CACGACCGAT
GACGACGTGA CGGTGGCGAT CGATCTCCCG GGTGCCGAGA CGGAGAATAT CCACCTGTCA
CTCATCAACG GGACGCTGAC GATCATCGCC GGCGGCAATC AGCTGACTTC GGTGGAGGTG
CCGGCCGTGG ACCCCGACTC CATGCAGTCG AGGTACAAGC ACGGCGTCCT GGAAGTCAAA
TTCTCGCGAG GCAAGTCGAT CAGGATCGAC TGA
 
Protein sequence
MSDSPADIFE QLNELMKRLM EQGLKEQGDQ NRPFAYGFKI VLHDAGMPEI PATEAAPVAE 
PKEPSSEGTI EPIAEMYTTD DDVTVAIDLP GAETENIHLS LINGTLTIIA GGNQLTSVEV
PAVDPDSMQS RYKHGVLEVK FSRGKSIRID