Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1316 |
Symbol | |
ID | 4846949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1300017 |
End bp | 1301312 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640116007 |
Product | sodium:neurotransmitter symporter |
Protein accession | YP_001047228 |
Protein GI | 126179263 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.745347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGAG AAGAGTGGTC ATCAACGCTG GGCTTCATCC TTGCAAGCAT CGGCTCGGCC GTAGGTATCG GGAACATCTG GCGGTTCCCC TACGTCGTGG GCGCCAACGG GGGCGGTGCG TTTCTGATCC CGTTCCTGAT CGCCGTCCTT CTCTTCGGCC TCCCCCTGAT GGTGTTGGAA CTTGCCATCG GCCGCTCGAC AGGGACATCG GTCATATCCG CCTTCCGCTC GATACGGCAG CGGTTCGCCG CCGCCGGTCT CGTCATCGTC GCGGTCGTCA GCCTGATCCT CGGCTACTAT CTTGTGATCA CGAGCTGGGT GCTCGCATAC GCGCTCTTCT TTGCCTTCAA CCAGCCGATG GAGTTCGATG CGTTTACGGG TTCCTACCTC CCGCTCGTCT TCTTCCTCCT CTCGGGACTC GCGGTCTATG TGACGGTGCG GTCGGGGGTC CGGGGAGGGA TCGAGCGGGC CTCCCGGTAT CTCATCCCGG TTCTCCTCGT GATCCTCCTC TTCCTCGTGG CCGTCTCGCT CACGGAGCCC GGAGCGGCCG AGGGGATCGG GTTCTACCTC TCCCCTGATT TTTCGAGGCT GACCGACCCC GCCGTCTGGA TCGCGGCCTT CGGGCAGGCT TTCTTCTCGC TCTCCGTGGG CATGGGCATC CTGCTCACCT TTGGAAGTTA CCTCAAAAGG GAAGCCCTCT TCCGGAACGC CGCCATCATC GCCGCCGCCG ATATGCTGAT TGCAGTCCTT GCCGGGCTCG TGATCTTTCC CCTGGTCTTC ACCGCGGGTC TCGACCCTGC AGCCGGGGTG AACCTCGCGT TCATCACCCT GCCCACGGCC TTTACGGAGA TCCGGTACGG CATGGTGCTC GGAACGCTCT TCTTCCTGAT GCTCTTTGCA GCGGCGCTCA CCTCGGCGGT CTCCATGCTC GAGGTTCCCA CGGCGGCGCT GATGGACTCC TACGGCTACC CCCGGAAGCG TGCCACGCTT CTTGTCTTCG CCGCGGTCAT GCTCTTCGGA CTTCCGTCCG CCCTCAGTTA CACCGCCCTG AACCTCGAAG CGCTTGGAAT GCCGTTCCTC GACCTTGCCG ACTACGTATT CGGGACGATC GGCCTCATCG TGGCCGGGCT GATCATAAGC ATCGTCGGAG GGTGGTTCAT GACCCGCACC CGGATCTATG CAGAGATCGG CGGCTGCGGG TGGCAGCAGA AGGTCTATAT GGCGCTCATC CGCTACGGCG TTCCGGCCGT TCTCCTGATC ACGCTCGTCG GCAGTTTCTT CCGGGGCACG GGGTGA
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Protein sequence | MEREEWSSTL GFILASIGSA VGIGNIWRFP YVVGANGGGA FLIPFLIAVL LFGLPLMVLE LAIGRSTGTS VISAFRSIRQ RFAAAGLVIV AVVSLILGYY LVITSWVLAY ALFFAFNQPM EFDAFTGSYL PLVFFLLSGL AVYVTVRSGV RGGIERASRY LIPVLLVILL FLVAVSLTEP GAAEGIGFYL SPDFSRLTDP AVWIAAFGQA FFSLSVGMGI LLTFGSYLKR EALFRNAAII AAADMLIAVL AGLVIFPLVF TAGLDPAAGV NLAFITLPTA FTEIRYGMVL GTLFFLMLFA AALTSAVSML EVPTAALMDS YGYPRKRATL LVFAAVMLFG LPSALSYTAL NLEALGMPFL DLADYVFGTI GLIVAGLIIS IVGGWFMTRT RIYAEIGGCG WQQKVYMALI RYGVPAVLLI TLVGSFFRGT G
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