| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1286 |
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| Symbol | |
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| ID | 4847693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1267194 |
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| End bp | 1268828 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640115976 |
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| Product | PUA domain-containing protein |
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| Protein accession | YP_001047198 |
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| Protein GI | 126179233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000728632 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGGT ATGAGGCGCA GAAGCGCGAC GGCCTTGCCC GGGTAGGAAC CTATGAACAC
GAAGAGGCGA GCGTATCCCT CCCCGCCGCC CTCGATACGG ACGCCCTCTT CCCCACGCTC
CGCGACCGGG CTCTCTCGAA CGTCCCGCTC GCCATCGACC CGGCGTTCGT GGAGAACTAC
TTCAGCCCCG GCGAGGGGCA GCCGGTGACC GTCCACCCGC TCGCCGCCTC GGCGGAGTCC
GGTGACTGCG TCCTGGTCGC GAACTGGCAC ACGGCGGAGA AGAACCCCCG GAACTACGCG
ACGTGGCTTA ACACGCTGAA AGAGAAGATC CCGCCGGACA CCGCGTGGTA CGCCCCGGCA
TCGGCGCTCC CCTCGACCGC CTGCCTCCTC GTCTACTCGG GTTTCGACCT CTTCGACTAC
CGGGCGGTCG ACCTCGCCAC GGCGCAGAAG AAGTTCTGCC TCCCCGAAGG CGAGTTCCCC
GCATCGCTGA TGGAGACCGG CGCCTGCGGG TGCGAGGGCT GCCGGGATGG CGACCTTCTC
CGGCACAACC GTCTCGCGCT CGACCGCGAA CTTGCCCTCG TGCGGCACTA CATCGAGGCG
GGCAGGCTCC GGGAACTGAT GGAGGCCCGG TGCCGCGCGG ACGCCGCGCA GGTCGGCATC
CTCCGGTTCC TCGACCGGAA CTACGCGTTG ATGGAACGCT CCCTTCCGGT GGCGCGGTCA
GTGCCGATGC GGGCCAACAC CGCCGAGTCG CAGAACAGGG CGGAAGTCCG GCGGTTCGCC
GACCGGGTGA TCGAGCGGTT CGTCCCGACC CGGACGGACG TCGCGGTTCT CCTCCCCTGC
TCGGCACGGA AGCCCTACTC GCTCTCCCGG AGTCACCGGC TTTTTGTGAA CACGGTGAAC
CGGCGGGCGC ACGAACTGAT CGTCACCTCG CCCCTCGGCC TCGTGCCGAG AGAACTCGAG
CGGGTCTACC CGGCGGGCCA TTACGACGTG CCGGTGACCG GATACTGGGA CCGTGAGGAG
TGCGCCTTCA TCGCCGATAT CCTCGCCCGC TACTTGGCTG CACACCCCTA CCGCCGGGTG
ATCGCGCACC TCGAGGGCGG GGCGCTCACG GTTGCAGAGA TGGCGGCGGA AGCCTGCGGG
ATCGACCTCG AGGTGACCTG CGAGGGCCAT CCGACGGCGC CGGGGTCCCT GCATGCCCTG
GATGCCGCCC TCGAAGGCGA GCGGCGGATG CAGACCGACA CCATCCGCGG CACGGTCTCC
TGGCAGTTCG CGACCGATAT CAACACGAAG GGCCTCCAGC TCCGGGGGAG GAGCATGCAG
ATGGCGGTGC TCCGCGGGAA GCAGCAGCTC TTCAGCATCG ACCCCGGGAC CGGGCTGTTC
CGCCCGACGT TTGCGGGATG GGACCTGATA CCCGAGGGCT ACCGGATCAA GATCGACGAG
TTCGTGCCGC AGGGCGACGT CCTCGCCCCG GGCATCACCG ACTGCGACCC CCGGATACGG
GAGGGCGACG AGGTGCTGGT CGAAGGACCG CTCGCGATCG CCACCGGCCG GGCGATGATG
GGCGCGGACG AGATGCTCCG GTCGAAGCGC GGTGTCGCGG TGCGGGTGCG GAAGGTGAAG
AAGATCGGGG AGTGA
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| Protein sequence | MSRYEAQKRD GLARVGTYEH EEASVSLPAA LDTDALFPTL RDRALSNVPL AIDPAFVENY
FSPGEGQPVT VHPLAASAES GDCVLVANWH TAEKNPRNYA TWLNTLKEKI PPDTAWYAPA
SALPSTACLL VYSGFDLFDY RAVDLATAQK KFCLPEGEFP ASLMETGACG CEGCRDGDLL
RHNRLALDRE LALVRHYIEA GRLRELMEAR CRADAAQVGI LRFLDRNYAL MERSLPVARS
VPMRANTAES QNRAEVRRFA DRVIERFVPT RTDVAVLLPC SARKPYSLSR SHRLFVNTVN
RRAHELIVTS PLGLVPRELE RVYPAGHYDV PVTGYWDREE CAFIADILAR YLAAHPYRRV
IAHLEGGALT VAEMAAEACG IDLEVTCEGH PTAPGSLHAL DAALEGERRM QTDTIRGTVS
WQFATDINTK GLQLRGRSMQ MAVLRGKQQL FSIDPGTGLF RPTFAGWDLI PEGYRIKIDE
FVPQGDVLAP GITDCDPRIR EGDEVLVEGP LAIATGRAMM GADEMLRSKR GVAVRVRKVK
KIGE
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