Gene Memar_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1227 
Symbol 
ID4847891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1205814 
End bp1207142 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content68% 
IMG OID640115917 
ProductAIR synthase related protein 
Protein accessionYP_001047140 
Protein GI126179175 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1973] Hydrogenase maturation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTAG AAGAGATCAG CCGCCGGCAC CTCGCCGCCG GCGCCCCTGA CGACGAGATC 
GTGCGCCTTC TCGCCCGGGA TATCCTCTCG ATCAAGCATC ACCGCGTAAC CCCCGCCTAC
GCCGAGGCAT TCGCCCGGGC GGTCCTTACC GAAGCGAAGA ACTCGACCGG GCTCTCCGGC
GACCTCTTCA CGTTCGAGTC CTCCGGCTCG ACCATGGGCG AGTTCGGCGT CGGCTCGCGG
GGGTCCGGCG ACTTCTTCGC CCACCGGCAG CTCGCCCGGA TCATCGGCCG GACAGAAGCC
GCGGTCGGCG TCGACGAGAT GGACGACGCC GGCGCCGTCC GTGCCGGCGG GGACTACATC
ATCACCACCG TCGACGGGAT GCACTCCCGC CTCTCCGACT TCCCCTTCCT TGCCGGGTTC
CACGTCACCC GGGCGACGCT CCGCGACGTC TACGTCATGG GGGCAAAACC CGTCGCGCTC
CTCTCCGATA TCCACGTCGC CGACGACGGC GACGTCGCGA AGATATTCGA CTACACGGCG
GGCGTCTCCG CCGTCGGCGA GGCGATGGAC GTCCCGCTCG TCACCGGCTC CACCCTCCGC
ATCGGCGGGG ATATGGTGCT CGGCTCCCGG ATGACCGGGT GCGTCGGCGC CGTCGGCGTC
GCCCGTCACC TCACCGCCAG GAAATCGATC AGCCCCGGCG ACGTCCTCCT CATGACCGAG
GGGGCAGGCG GCGGGACGAT CGCCACCGCC GCGATCTACT CCGGGTTCCC GGATGTTGTC
GAGGAGACGA TCAACCTCCA CTTCCTCAAA GCCTGCGAGG CGCTCCTTGC AAGCGACGTC
CTCGACGGCA TCCACGCCAT GACCGACGTC ACGAACGGCG GGCTCCGGGG CGACGCCTAC
GAGATGGCCG AGACCGCCAA TTGTCGGATC GTCGTCGTCG AGGACGAACT CCGCACCCTC
GTCCAGCCGA ACGTGCTCAG GATGCTCGAC GCGCTCGAGA TCGACTACCT CGGCGTATCG
CTCGACGCCC TCCTGGTCGT CGCACCGCCG GAGGCTGCGC CGGAGATCCG GCGGGTCGTC
GAGTCCGCCG GCGTCGCGAT GAAAGAGGTC GGCTACGTCG AGGAAGGAAA GCCCGAATCC
GTCCTCTCGG TCGGCGGCGA GATTCGGGAC TTTACCCCCC GGTTCCGGGA GTCGGCCTAC
ACCCCGGTCA AGAAGGTCGT GGACGAAGAC AAACGGGACT TCGAGGAGAT GAAGGCCGGG
GTCGAGCGGG CGGCGGAGGC GGCGCTTGCA AAGAAGCTCC GGATCCTCTC CCGGCTCCGG
TCTTCGTGA
 
Protein sequence
MDVEEISRRH LAAGAPDDEI VRLLARDILS IKHHRVTPAY AEAFARAVLT EAKNSTGLSG 
DLFTFESSGS TMGEFGVGSR GSGDFFAHRQ LARIIGRTEA AVGVDEMDDA GAVRAGGDYI
ITTVDGMHSR LSDFPFLAGF HVTRATLRDV YVMGAKPVAL LSDIHVADDG DVAKIFDYTA
GVSAVGEAMD VPLVTGSTLR IGGDMVLGSR MTGCVGAVGV ARHLTARKSI SPGDVLLMTE
GAGGGTIATA AIYSGFPDVV EETINLHFLK ACEALLASDV LDGIHAMTDV TNGGLRGDAY
EMAETANCRI VVVEDELRTL VQPNVLRMLD ALEIDYLGVS LDALLVVAPP EAAPEIRRVV
ESAGVAMKEV GYVEEGKPES VLSVGGEIRD FTPRFRESAY TPVKKVVDED KRDFEEMKAG
VERAAEAALA KKLRILSRLR SS