Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1134 |
Symbol | |
ID | 4847178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1112086 |
End bp | 1113669 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640115822 |
Product | Na+/solute symporter |
Protein accession | YP_001047048 |
Protein GI | 126179083 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTG ATACGGGGCT CTTCGTCGCA ATGACGCTGG TATACCTCGT CCTCATCATC GGCCTCGGTT ACCTCGGCTA CCGCCGGACA AAAGAGAACG ACGACTACAT GGTCGCCGGG AGGAAGATCC ATCCCGTGGT TCTCGCCCTC TCCTACGGCG CGACCTTCAT CAGCACCTCC GCCATCGTCG GGTTCGGCGG GGTTGCGGCG CAGCTCGGCA TGGGGATGAT CTGGCTGACC GTCCTCAATA TCGGACTCGG GATCTTCATC GCGTTCGTCT TCTTCGGAAA ACGGACCCGC CGGATCGGGA GCAAGCTCCG TGCCGTGACC TTCCCCGACC TGATGGGGAA GTGCTACGGG TCGCCGTTCA TGCAGTATGC CGCGGGAACC GTCATCGTCC TCGGCATGCC GCTCTACACG GCGGCGATCC TGATCGGCGG CGCCCAGTTC ATCACGAGCA CGCTGCAGAT CCCCTACACC ACCGCGCTCC TCGGTTTCGC GGCGATCGTC GCCCTCTACG TGGTGCTCGG CGGGCTCATC GCCGTTATGT ACACCGACGC GCTGCAGGGC GGGATCATGC TCGTCGGGAT GACCATCCTC CTCGTGCTCA CCTACATCCG GCTCGGGGGC GTCGTCGAGG CGCATACCGC CCTTGCCGGG ATGTCGGACC TCGTCCCGGA GGCGCTCGCC GCCGGGGGGC TGACCGGGTG GGCGTCCATG CCGGCGTTCG GGTCGTCCAT CTGGCTCACG CTGGTGACGA CGCTCGTTCT CGGGGTCGGC ATCGGGGTGC TGGCGCAGCC CCAGCTGGTC GTCCGGTTCA TGACCGTCAA AGACAGCCGG GCGCTGAACC GTGCGGTCCT CGTCGGCGGG CCGTTCATCC TGATGATGAC CGGGGTCGCC TTCACGGTCG GGGCGCTCAC GAACGTCTAC TTCTACCAGA CGGAAGGCGT GACCGCGCTC GCGGCGGCCA CCAACGGCAA CGTAGACACG ATCATCCCGA ACTTCATCAA CGCGTCGATG CCGGACCTCT TCGTCGTCGT CTTCATGCTG GCCCTCCTTG CCGCGGCGAT GTCCACGCTC AGTTCCCTCT TCCATACGAT GGGAACGTCG CTCGGGTTCG ACGTCATACG GCGCACCGGG ACGGAGAAGG CGACGATGCG GCCGATCCGG CTGGCGACCG TCGCCATGAT CGTCGTGAGC ATCATTCTCG CCTTCATCAT GCCCGGCAGC ATCATCGCCC GGGCGACGGC GATGTTCATG GGCCTCTGCG CTTCGGCGTT CCTGCCGACC TACGCCCACG CCATGTACAG CAGCAGGCCG TCGCTAAAGG CGGCGAAAAT GAGTCTCGTC ACCGGAGCGG TCGCCTGGTT CGCGTGGACG GCCTTCGTGC ACGTCAAGGA GTCGGCGGCG CTCGGGCTCT CCAACCTCCT CTTCGGGGTT CCGGCGGTCC TCTCCGCCCC GTGGCAGGAC GTGGACCCGC TCGTCATCGC GCTCCCCCTC TCGACGGCCG CGCTGCTGGT CGGGTGGGCG CTCGACCGCC ACGAGGTGAC TGCGGATACG GAGGAGTCGG CCGGGGCGGC CTGA
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Protein sequence | MAVDTGLFVA MTLVYLVLII GLGYLGYRRT KENDDYMVAG RKIHPVVLAL SYGATFISTS AIVGFGGVAA QLGMGMIWLT VLNIGLGIFI AFVFFGKRTR RIGSKLRAVT FPDLMGKCYG SPFMQYAAGT VIVLGMPLYT AAILIGGAQF ITSTLQIPYT TALLGFAAIV ALYVVLGGLI AVMYTDALQG GIMLVGMTIL LVLTYIRLGG VVEAHTALAG MSDLVPEALA AGGLTGWASM PAFGSSIWLT LVTTLVLGVG IGVLAQPQLV VRFMTVKDSR ALNRAVLVGG PFILMMTGVA FTVGALTNVY FYQTEGVTAL AAATNGNVDT IIPNFINASM PDLFVVVFML ALLAAAMSTL SSLFHTMGTS LGFDVIRRTG TEKATMRPIR LATVAMIVVS IILAFIMPGS IIARATAMFM GLCASAFLPT YAHAMYSSRP SLKAAKMSLV TGAVAWFAWT AFVHVKESAA LGLSNLLFGV PAVLSAPWQD VDPLVIALPL STAALLVGWA LDRHEVTADT EESAGAA
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