| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1079 |
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| Symbol | |
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| ID | 4847955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1067923 |
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| End bp | 1068348 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640115767 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001046994 |
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| Protein GI | 126179029 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1
[TIGR02286] phenylacetic acid degradation protein PaaD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.185499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGAGA CCGTATCCAT CCCGAAAGCC TATTCTGCGG CGGTGCAGCG TTCCGACGCC
TGCGAGTTCG CACGCCTGCT CGGGCTGGCG GTCACGGCGA TCGGGGACGG CCTTGTTAAG
GTGGCGATGG CGACCGAGGG CATGAAGAAC GCCCACGGCA CGACCCACGG GGGCGCGATC
TTCGCCATCG CCGACCACGC GTTCGGCGTC GCCGCGAACA TGGAGGGGAT CGACCAGATC
GCGATCTCCG CTAACATCCG CTACTTCACT GTCCCCGCGG GGGAGACGCT CGAAGCGGTC
GCCTATATGG TCTCGGAGAC GGAGAGGACG TCCGTCTACG CCGTCGACGT CTACTCGGGC
GACCGGCTGG TCGCAACGTT CGAGGGCGTC GGGTTCAAGA TCGGGGGAAC GGCGAAGCGG
GAGTGA
|
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| Protein sequence | MKETVSIPKA YSAAVQRSDA CEFARLLGLA VTAIGDGLVK VAMATEGMKN AHGTTHGGAI
FAIADHAFGV AANMEGIDQI AISANIRYFT VPAGETLEAV AYMVSETERT SVYAVDVYSG
DRLVATFEGV GFKIGGTAKR E
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