| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0983 |
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| Symbol | |
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| ID | 4847569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 966492 |
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| End bp | 967376 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640115670 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001046898 |
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| Protein GI | 126178933 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTC GCATAGGCAC ACGGGGAAGC GCTCTCGCGC TTGCGCAGAC GAACAAGGTG
GTCGGCATGC TCGCCGACCG GGGCATCGAG GCGGAGGTCG TCACGATCGC GACCGAGGGC
GACACCGCGA CCGGGGTCCC GCTCCACGCC ATCGGGGGGC AGGGGGTCTT CGTCCGGGCA
CTCGACGACG CGATCCTCCG CGGCGAGATC GACGCCGCGG TGCACAGCAT GAAAGACATC
CCCGCGGCCC GCCCGGCGGG GCTCGTCTGC TGCGCGGTGC TCGAGCGGGA CTCGCCCGCC
GATTTCCTGG TACACGAGTG CCCCCTCGAT GCGGTCTCTG TCATCGGGTC GTCGAGCACC
CGGCGCTGCG CCCAGCTCCT CCGCGACGCC CCGGCGCTTG AGGTGAAGCA GCTCCGCGGG
AACGTCGATA CCCGGTTACG GAAGCTCCGC GAGGGGCAGT ACGACGCCAT CGTGCTCGCG
GAGGCGGGCC TCCAGCGCCT CGGGCTCACG CTGCCGGGAG AGCCCCTCCC CACCGACCGG
TTCGTCCCGT CCCCGAACCA GGGAACCATC GCAGTCGTCT GCCGGGACGA CCCGGCCGTC
GCCGGCGCCT TCGCGGCGCT CGACCACGCG CCGACCCGCC TCGACGTCGA GATCGAGCGT
GCCGTCATGG AGGAGGTCGG CGGCGGGTGC TTCACCCCGC AGGGGATCTA CTGCCGGAAC
GGGAACCTGA TCGCCGAGGT GCTTGCGCTC GACGGCTCCC GGTGGGAGCG GATCGAGCGG
CACGTCGCGA CCGTCGGCGA AGCCCGGGAG TGGGGGCGGG CGCTGCGCGT GCAGGCGGCC
TCCCTGATTC GTGAGGCTCA TGCGGCACTG GGGATAAAAC CATGA
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| Protein sequence | MSLRIGTRGS ALALAQTNKV VGMLADRGIE AEVVTIATEG DTATGVPLHA IGGQGVFVRA
LDDAILRGEI DAAVHSMKDI PAARPAGLVC CAVLERDSPA DFLVHECPLD AVSVIGSSST
RRCAQLLRDA PALEVKQLRG NVDTRLRKLR EGQYDAIVLA EAGLQRLGLT LPGEPLPTDR
FVPSPNQGTI AVVCRDDPAV AGAFAALDHA PTRLDVEIER AVMEEVGGGC FTPQGIYCRN
GNLIAEVLAL DGSRWERIER HVATVGEARE WGRALRVQAA SLIREAHAAL GIKP
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