Gene Memar_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0956 
Symbol 
ID4847141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp938661 
End bp939884 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content41% 
IMG OID640115642 
Productpolysaccharide pyruvyl transferase 
Protein accessionYP_001046871 
Protein GI126178906 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.383692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCCC TTTTGTTGAA TGTAGGGGTT ACGAATAAAG GCAATGAAGC ATTGGTTATT 
TCGACGAAAA AGGTTATCCA GGATTTTAGA GACGATATAA AATTTATTAA TGTAGGATCA
GAGGGAGACG ACGAAAACCA AATAGTCCCC CAGATTGCAA GAAACCCAAC GAGATCCCCA
TATCCATGGT TATATCTTAT AGAATGCGTG GGGATACGTG CGTTGCGTCG ATGTGGTTTT
GCTGTAAGTG TTTCGAAGAA ATCAAAATTA AGCATATACA ATGGAGTGGA TGTTGTTGTT
AATAGCGGAG GGGACCAGCT AAGCGGAGAG AAAATCATAG GAAACAGTTT TCTAAACCTT
CTATATCCGC TTTTACTTGA CAAACCAGTG GTGTTGTTTG CAGAAAGCCT CGGATACTAC
AGGTATTCTG TAAATCGCCT GGTGGGGAGA TATATCTTCA GGAACGCCAA ACTGATCTTA
GTCCGGGAAG AACTCTCCAA AGAATATCTA ATCGATCTTG GTATAGATGC GGGAAAGATA
TTCGTGACTG CAGATCCTGC GTTCGTTTTG CCTCCTGCAC CGCGTTCGAG AATCGATGAA
ATACTCCGCT CAGAAGGAAT TCCACGCATT CCAGACCCGA TTATCGGGGT AAATCCCAGC
GGATTGATAA GCAGATATTT TAATGACCCT GAAAAATCCG AAGACCACTA TGTGCAGTCA
ATAGCGGATG TAATCGATTA TCTCATCGAA ACTAAAGAGG CGAGCGTTCT CTTAATTCCG
CATGTATACT CAAAAGATGT TGACGACCGA ATTATTATTC AAAAAGTCAT GGAAAAAGTT
CAGAATCGTC AACATGTTTT CCAGATCACC AATGAATACT CTGCCGCAGA ATTGAAAGGA
ATTATCGGGT TATGCGATGT TTTCATCGGA TCACGAATGC ATGCCACGAT TGCTGCGACA
TCCCTCTGCG TACCGACAAT AGGAATATCT TACAGCCACA AAATTCATGG AATTGTTGGA
AAAACACTTG GTCTGGAACG ATATATCATA GATATTAATA AATTGGACAG CGATGTCCTG
AAATCAGTAG CTGAAACCGT ATGGTCTGAT AGAAGTAGCA TTAAGAAACA CCTTGAAAAT
GTTATTCCAG AAGTGAAAGA AAAATCATTA TTGAATGGAT ACCTGTTTGC GAAGTACCTC
GAATCGGATC TATCTCCGAT CTAA
 
Protein sequence
MIALLLNVGV TNKGNEALVI STKKVIQDFR DDIKFINVGS EGDDENQIVP QIARNPTRSP 
YPWLYLIECV GIRALRRCGF AVSVSKKSKL SIYNGVDVVV NSGGDQLSGE KIIGNSFLNL
LYPLLLDKPV VLFAESLGYY RYSVNRLVGR YIFRNAKLIL VREELSKEYL IDLGIDAGKI
FVTADPAFVL PPAPRSRIDE ILRSEGIPRI PDPIIGVNPS GLISRYFNDP EKSEDHYVQS
IADVIDYLIE TKEASVLLIP HVYSKDVDDR IIIQKVMEKV QNRQHVFQIT NEYSAAELKG
IIGLCDVFIG SRMHATIAAT SLCVPTIGIS YSHKIHGIVG KTLGLERYII DINKLDSDVL
KSVAETVWSD RSSIKKHLEN VIPEVKEKSL LNGYLFAKYL ESDLSPI