Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0896 |
Symbol | |
ID | 4846921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 874795 |
End bp | 875508 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640115582 |
Product | hypothetical protein |
Protein accession | YP_001046811 |
Protein GI | 126178846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.241372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCCGG TCGTCGAGGC GATACGGCAG GAGTTTGCAG CGCAGGCGGA CCCCGAACTC CGGGAGAGAG GCCAGCGGTT CTTCAAGGAG GAGGTTCGGT GCTACGGGAT GAAGACGGCA ACCGCAGTCG CGATCGCGAA AAAATACTGG AAGGAGGTCA AATCCCGCGA GAAGCAGGAG ATCTTCGCCC TCTGCGAGGA ACTCTATTCT TCGGGGATGA TGGAGGAGGC GTTCGTCGTC TCCCGGTGGG CTCCGCGGCT CGCCGACCGC TACGAACCCG GCGATATCAC CGTCTTCCGG CACTGGATTG AGAACTACAT CACCAACTGG GCCACCTGCG ACGGCCTCTG CAACCATGCC GTCGGGGACT TCATCGTCCG TTACCCGGAG GGGATCGAGG AGCTGAAGCG CTGGACGCAG TCGGAGAACC GCTGGATGCG GCGGGCGGCG GCGGTCTCGC TGATCGTGCC CGCGAAGCGC GGGGAGTTCC TCGACGAGGT CCTTGCAATC GCCGACCTCC TCCTGACCGA CAGGGACGAC CTGGTGCAGA AAGGCTACGG ATGGCTCCTC AAGGAGGCGA GCCGGAAGCA CACGGACGAG ATCTTCTCCT ACGTCATGGC GAAGAAGCGG GAGATGCCCC GGACGGCGCT CCGGTACGCC ATCGAACTGA TGCCGAAGGA GTTGAAGGCC GAGGTGATGA AGAAAGATTG GTAA
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Protein sequence | MDPVVEAIRQ EFAAQADPEL RERGQRFFKE EVRCYGMKTA TAVAIAKKYW KEVKSREKQE IFALCEELYS SGMMEEAFVV SRWAPRLADR YEPGDITVFR HWIENYITNW ATCDGLCNHA VGDFIVRYPE GIEELKRWTQ SENRWMRRAA AVSLIVPAKR GEFLDEVLAI ADLLLTDRDD LVQKGYGWLL KEASRKHTDE IFSYVMAKKR EMPRTALRYA IELMPKELKA EVMKKDW
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