Gene Memar_0584 details

Gene Information

• Locus tag: Memar_0584
• Symbol: rps5p
• ID: 4846551
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 559147
• End bp: 559764
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640115266
• Product: 30S ribosomal protein S5P
• Protein accession: YP_001046499
• Protein GI: 126178534
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0381011
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATACG TACAGGAAGA ATGGATTCCG CTCACCGGTC TCGGGCGCAT GGTCGCCGCA 
GGCGAGATCA CCAGTATCGA TGAGGTGCTC GCGAGCGGCA GGCCGATCAA GGAGCCCCAG 
ATCGTCGATC TCCTCCTGCC AGACCTGGAG GACGAGGTGC TGGACATCAA CATGGTCCAG 
CGGATGACGG ACTCGGGTCG CCGTGTGAAG TTCCGCACCG TCGTGGTGGT CGGCAACAGG 
AACGGCTACG TCGGGTTCGG CCAGGGGAAG GACGTCCAGG TCGGCAACGC GATCCAGAAG 
GCAATCGTAA ACGCAAAACT GAATCTGATC AAGGTCTCCC GCGGCTGCGG CAGCTGGGAG 
TGCGGTTGCG AGACCGCTCA CTCGATCCCG ATCGAAGTGA CCGGCAAGGC AGGGAGCGTC 
AAGGTGACGT TGAAGCCCGC CCCGCAGGGT ATCGGTCTCG TGACCGGGGA TATCCCGAAG 
AAGGTTCTGA TGCTTGCAGG CATCAAGGAC GTCTGGGCGT TCAACCGGGG ACAGACCCGG 
ACGACCATCA ACTATGCAAA GGCGACGTTT GAGGCGCTGA AGCAGACGAA CATGGTTCGG 
ATCGGAGGGA CGGAGTGA 

 

Protein sequence

MAYVQEEWIP LTGLGRMVAA GEITSIDEVL ASGRPIKEPQ IVDLLLPDLE DEVLDINMVQ 
RMTDSGRRVK FRTVVVVGNR NGYVGFGQGK DVQVGNAIQK AIVNAKLNLI KVSRGCGSWE 
CGCETAHSIP IEVTGKAGSV KVTLKPAPQG IGLVTGDIPK KVLMLAGIKD VWAFNRGQTR 
TTINYAKATF EALKQTNMVR IGGTE