Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0459 |
Symbol | |
ID | 4847970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 445857 |
End bp | 446609 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640115136 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001046374 |
Protein GI | 126178409 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.160981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGCCG AAATAGTTCC CGGGCTCCGG GCTCTCGGGA TGAACGAATA CGAGGCAAGC GTCTACTCCA CGCTCGTCGG GCTGCAGAAG GCAACCGCAC GAGACATCCA CGAAGCAAGC GGGGTTCCCC GGGGACGGAT CTACGAGATC TTAAACGACC TGGCCCAGCG GGGCTTCATC GCGGTTGAAG AAGGATCCCC CACCTCCTAT TACGTGCTCG AGATCGACGT GGTCTTCGAC CGGCTCAAAG AAGATTACGT CCGGACTCTC GACGAGACCC GCGAGGTGTT AAAGAGCCTC TCGGTCAAAC CGCGTCTCCC TCCCGATTCG TTCTTCATCC TCAGGAGCGG CTGGGCGATC GAGAACCATC TCTCCTCGCT CTTCCGCCGG GTAAAGAAGA GCATGGTGAT CCTCTGCTAC GATCCGGCGT TTCTCCGGAA GCACTATGCG GCCATCAAAC CGCTCAAGCG CAAGATCGAC CTCTACGTGG TCGTACGGAA GAAGGAGGAT TATGCCGGGA TCAACCTCCC GATCTACGAG GCCAGGGGTA CCGTGCTTGA ACTCCTCGAG AGCCCGGCGG TGAACGAGTC CGCAATGGGC TTGAGGAAGG ATGAGTGCTC CATACTGGTC GACGGCCGTG ACTTCTTCGT CATCGCCACC GCGGGATCCG GGCGGCACGC GGTGATCGGC TCGGATATGC CGCTCATCGG TTACATGCAG AAGACGATCG TCGAGCGGCT CGCCGGGGCG TGA
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Protein sequence | MVAEIVPGLR ALGMNEYEAS VYSTLVGLQK ATARDIHEAS GVPRGRIYEI LNDLAQRGFI AVEEGSPTSY YVLEIDVVFD RLKEDYVRTL DETREVLKSL SVKPRLPPDS FFILRSGWAI ENHLSSLFRR VKKSMVILCY DPAFLRKHYA AIKPLKRKID LYVVVRKKED YAGINLPIYE ARGTVLELLE SPAVNESAMG LRKDECSILV DGRDFFVIAT AGSGRHAVIG SDMPLIGYMQ KTIVERLAGA
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