| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0271 |
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| Symbol | |
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| ID | 4847699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 248811 |
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| End bp | 250400 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640114943 |
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| Product | chaperonin Cpn60/TCP-1 |
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| Protein accession | YP_001046187 |
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| Protein GI | 126178222 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.25851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCTG GACAGCCCAT CATTATTTTG CGGGATAACG TTGAGCGCAC TCGCGGATTC
GAGGCGCAAC ACTCGAATAT CATGGCTGCA AAAGCAATTG CGGCCGCCGT TCGGACGACA
CTCGGCCCCA GGGGAATGGA CAAGATGCTG GTCAGCTCCA GCGGTGACGT GGTGATCACG
AACGACGGGG CAACCATCCT GCACGAGATG TCCGTGCAGC ATCCCGGCGG CAAGTTGATC
GTCGAGGTTG CGGAGACCCA GGACGACGAG GTCGGTGACG GCACCACGAC TGCAACCGTG
ATCGTCGGGT CTCTTATGGA AGAGGCGGAG ACGCTGCTCG CACAGGACGT GCACCCCACC
ATCATCGCGA ACGGCTATCA GCTCGGCATG GAGAAGGCCC TTGCAATCCT CGAGGAACTG
GCCATCGCCG TCAGTGCCGA GGACAAGGAA AACCTCATAA AACTCGCCGG AACCGCCATG
ACCGGCAAGT CCATCGAGGC AATCAAAGAC CAGATCTCCG GCATCGTGGT GGACGCGGTG
CGCCAGGTCG CGGGCAAAAC CGACCGGGGC ACCTACATCG TGGACGAGGA CGACATCAAG
ATCAAGAAGC AGGTCGGCGA CTCGATGGAC GACGCCGAAC TGATCCGGGG CATCGTCATC
GACAAGAAGC GCGTCTTCGA GCAGATGCCC GATAAGGTCA CTGACGCTAA AGTAGCCCTG
CTCGCCCAGC CGCTCGAGAT CACGAAGACC CAGGTGAAGT CGAAGATCAA GATCACCTCC
TCCGACCAGA TGAAGGCGTT CTCCGAGCAG GAGCGCGCGT CCCTCCGAAA ACTTGCCGAG
CAGATCGTTG CCGCCGGCGC GAACGTCGTC CTCTGCCAGA AGGGAATCGC TGACGCGGTG
CAGTATTACC TGGCAAAGGA TGGCATCTAC GCCATAGAAG ACGTGAAAGA GGCCGACATG
AAGTTCGCCG CGAGAGCGCT CTGCGGCAGC ATCGTCAACA AGCCCGAGGA GCTCACCGAG
GAGACGCTCG GCCACGCCGA GGCGGCCGAG GAAGTCCCCG ACGCCGACCT GACGATCATC
TCCGGGTGCG AAAACCCAAA GGCCGTCACG ATCCTCCTGC GGGGCACCTC CCAACTCCTG
CTGGACGAAC TCGAGCGGGC GGTCTACGAC GCGGCCCGGG TCATCCAGGA CGCCATCGAG
GACGGCAAGT TCGTCGTCGG CGGCGGATCG GTCGAGACCG AACTCCAGCT CCAGATTCGC
GACTACGCCG CAACAGTCGG CGGCCGGGTC CAGCTCGCTA TCGAAGCGTT TGCGAACGCT
TTCGAGGTCG TCCCGAGGAC GCTCGCGGAG AACTCCGGAT TCGACACCAT CGACAAGGTC
GTCGCCCTCC GGAAGGCCCA CGCCGACGGC GCGAAGCACG CCGGGCTCAA CGTCTACACC
GGCGAGGTCG TCGATATGTT TGAGGCCGGG GTCATCGAAC CCCAGCGGGT GAAGACCCAG
GCGATCAAGA GCGCGACCGA GACGGCCATG CTCCTCGTCC GCGTCGACGA TATGATGATC
ACCCAGACCG GACAGCCGGC CGGACAATAA
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| Protein sequence | MLAGQPIIIL RDNVERTRGF EAQHSNIMAA KAIAAAVRTT LGPRGMDKML VSSSGDVVIT
NDGATILHEM SVQHPGGKLI VEVAETQDDE VGDGTTTATV IVGSLMEEAE TLLAQDVHPT
IIANGYQLGM EKALAILEEL AIAVSAEDKE NLIKLAGTAM TGKSIEAIKD QISGIVVDAV
RQVAGKTDRG TYIVDEDDIK IKKQVGDSMD DAELIRGIVI DKKRVFEQMP DKVTDAKVAL
LAQPLEITKT QVKSKIKITS SDQMKAFSEQ ERASLRKLAE QIVAAGANVV LCQKGIADAV
QYYLAKDGIY AIEDVKEADM KFAARALCGS IVNKPEELTE ETLGHAEAAE EVPDADLTII
SGCENPKAVT ILLRGTSQLL LDELERAVYD AARVIQDAIE DGKFVVGGGS VETELQLQIR
DYAATVGGRV QLAIEAFANA FEVVPRTLAE NSGFDTIDKV VALRKAHADG AKHAGLNVYT
GEVVDMFEAG VIEPQRVKTQ AIKSATETAM LLVRVDDMMI TQTGQPAGQ
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