Gene Mchl_5346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5346 
Symbol 
ID7116263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5729567 
End bp5730901 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content70% 
IMG OID643528038 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002424034 
Protein GI218533218 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATG CGCTCACGAG CAAGGTGGCG CGGCGCCTGC TGCCCTTCCT GATGCTGTGC 
TACTTCTTCG CCTATCTCGA CCGGGTGAAT GTCGGCTTCG CCGCACTCAC CATGAACCGG
GATCTCGGCC TGTCGGCGAC GGCCTACGGG TTCGGGGCGG GTCTGTTCTT TCTCGGCTAC
GTCGCCTTCG AGGTGCCGAG CAACCTGATC CTGGAGCGGG TCGGGGCGCG GCTCTGGATC
GCGCGGATCA TGGTGACCTG GTCGCTGGTT TCGGCCTCGA CTGCGCTCGT CGTCGGCGAA
TGGTCGTTCT ACCTCGTGCG CATCGGGCTC GGGCTCGCCG AAGCCGGCTT CTTCCCCGGC
ATCATCCTCT ATCTCACCTA CTGGTTTCCC GCCCGGCAGC GCGCCGGCAT CGTCGGCACC
TTCATGATGG CGGTGCCGCT CTCGGCAGCG ATCGGTGCGC CGCTCTCGGG CCTCGTCATG
AGCCTCACCG ACGGCTGGCT CGGGCTCGCG GGCTGGCAGT GGCTTTACCT GCTGGAAGCC
GCACCCAGCC TGCTTCTCGG CATCGCGACC CTGTTCGTGC TGACCGACCG GCCGGAACGC
GCCTCGTGGC TGACCGCCGA GGAGCGGGCG AGCCTCGTGG CGCGGATGGC GGAGGATCGC
CGGCTCAGCC CGAACCGGAC GGCGCATCTG GGTGCAGCCC TGCTCGACCC GCGGGTGCTC
GGGCTCGGGC TGGTCTATTT CGGGCTCAGC ACCGGACTCT ACGCCGTCGG CCTGTGGTTA
CCGCAGATCG TGAGCGGCTT CGGCTTCACG ACGACGGCGA CGGGGTTCGT GACCGCCGTG
CCCTACATCG TCTCCGCTGC GGGCATGCTG CTCTGGACGC GCCATTCCGA CCGCACGGGT
GAGCGCACCC GCCATGTCGC GATCCCGACG GTGGCCGCCG GCCTCGCCCT CTTCGCCGCG
AGCCGGGCCG GCACACCGCT CCTGACCATC GCCGCGCTCA GTGCGGTGGC GCTCGGCGTT
TTCGCGGCTC TGCCGACCTT CTGGACATTG CCCACCCGCC TCCTCACGGG CAGCGCGGCC
GCGGGCGGCA TCGCCCTGAT CAACGCGCTC GGAAGCCTCG GCGGATTTGC CGGACCCGCC
CTCATGGGCT GGATCCGCGA TGCGACCGGC CGCTTCGACG ACGCGTTGGC GGCGGTGGCC
GCCGTGCTGG TTGTGGCAGG GCTCGCGGTT CTTCGTCTCG GCCGGGACAT CGCGCGGGAT
ACGGGCGCGA GCGCGGATGC CGGACCGGCC CGAAGCCCCG AGGGAGACGC TCGACCGGCG
CCAAATCAGC AATGA
 
Protein sequence
MADALTSKVA RRLLPFLMLC YFFAYLDRVN VGFAALTMNR DLGLSATAYG FGAGLFFLGY 
VAFEVPSNLI LERVGARLWI ARIMVTWSLV SASTALVVGE WSFYLVRIGL GLAEAGFFPG
IILYLTYWFP ARQRAGIVGT FMMAVPLSAA IGAPLSGLVM SLTDGWLGLA GWQWLYLLEA
APSLLLGIAT LFVLTDRPER ASWLTAEERA SLVARMAEDR RLSPNRTAHL GAALLDPRVL
GLGLVYFGLS TGLYAVGLWL PQIVSGFGFT TTATGFVTAV PYIVSAAGML LWTRHSDRTG
ERTRHVAIPT VAAGLALFAA SRAGTPLLTI AALSAVALGV FAALPTFWTL PTRLLTGSAA
AGGIALINAL GSLGGFAGPA LMGWIRDATG RFDDALAAVA AVLVVAGLAV LRLGRDIARD
TGASADAGPA RSPEGDARPA PNQQ