Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4170 |
Symbol | |
ID | 7115295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 4396389 |
End bp | 4398413 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643526884 |
Product | RNA-binding S4 domain protein |
Protein accession | YP_002422892 |
Protein GI | 218532076 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA TTCCAGACCC CTCCCCGGCC GTGCCCGCGG ACCAACCCGC CGCGCCCGAG GGCGAGCGCA TCGCCAAGGC CATCGCCCGC GCCGGCATCG CTTCCCGCCG CGACGCGGAG GCCCTGATCG AGGCCGGCCG CGTCACCCTC AATGGCAAGG TTTTGACCTC GCCGGCGATC AACGTCACCG ATTCCGATCG CATTACGGTG GACGACGAGC CCCTGCCCGC CCGCGAGCGG ACCCGGCTGT GGCTGCTGCA CAAGCCGCGC GGCGTCGTCA CCACCGCCCG CGACCCGGAG GGCCGCCCGA CGGTGTTCGA CGGCCTGCCC GAAGAGCTGC CGCGGGTCGT CGCCATCGGC CGGCTCGACA TCAACACCGA AGGGCTGCTG CTCCTCACCA ATGACGGGGG GCTGGCCAAG GTGATCGCCC ATCCCGATAC CGGCTGGCTG CGCCGCTACC GGGTGCGCGC CTTCGGTGAC GTGACCCAGC CCGATCTCGA CAAGCTCAAG AAGGGCCTGA CCGTCGACGG CATGGAGTAC GGCCCGATCG AGGCGACCCT CGACCGGGCG CAGGGCGACA ACGTCTGGCT GACGCTCGGC CTGCGCGAGG GCAAGAACCG CGAGGTCAAG CGCATCCTCG AGCATCTCGG CCTGTCGGTG AACCGGCTGA TCCGGCTCTC GTTCGGACCG TTCCAACTCG GCGACCTCGA AGTCGGCCTC GTTGAGGAGA TCCGCACCAA GGTTCTGAAG GACCAGCTCG GAAAGAACCT CGCCGAGCAG GCCGGCGTCG ATTTCGAGAG CCCGGTGCGC GAGACGATCG CCCCCTTCGG CAGCCCGAAG AAGGCCACCC GCGCCACGCA GGCGGCGCCC GCAGGACGGG GCCGTCAAGG CGCGCGCGAC GAGGGCGCCT CGGAGCCCCG CTCGGGGTCT CGCGGCGGCT CGGCCGGCCG TCCGCCGCGC GATCCCGCCC GCCCTGCCGC CCCCCGCGCC GGGGCACGCC CGGCCCCGCG TCCCCCTTCC CCGACCGTGT GGCGCGCCGA CGAGGAGACG CGGCCTCGCG CCTCGAAGGT GCCGCGCCGG GGCATGGACC CCAAGACCGC CCGCGCGGCG GCGGCCGAGC GCGGCCGCGA GCGGGTCGGC GCGATCCAGG CGGCCGGCGA GCGCCGGGTG CTGGTGGAGC GGCTTCAGCC CTCGCCAGAG AAGCCCGCAC CCGAGCCGCA TCGCCGGGTC CGCTTCCGCA ACGAGGAGGA GCGGTCCGCG CCCCGCGACA GGGCGCGCGA AGACAGGCCG CGCCAGGATC GGCCAGGTCA AGATCGGCCG CGTGAAGACC GGCCGCGCGA TGACAGGCCG CGCAGCGAGG GACCGCGCGA GAACCGCGCC CGCGACGAGC GGCCGGGCCG GGACGAGTTC CGACGCGGCG CACCCGCGGG CGATGCCCGT CCCCGCCGCC GTGAGGCCGG GGAGGCCGCA CCGGCCGAGC GGCGCGGGCC GCCCCGCGAG CGTCCGTCCG ATTTCGAGGG GAGTCCGCCG CGCGAGCGGA GCGAGGGCCG GCCCCAGCGT GACTTCCATG GTGACTCCCG TGAGCGCGGC GAGGGCGCAC CCCGCCGCGA GCGGCCGAGC GAAGGGCGCC CGCCCGAGCG TCGCGGCCCC CCGCGCGACC GGCCCCGTGC CGCCGAGGGC GAGCGGCCGG CCCGCCCCCC GCGCAGTGCC GAGGCGTCCG ATCGTCCCGC CTTCCGCAAG GGCCCCGGCA AGGGGCCCGG TGGTGGTGCA GGCAAGAGCT TCGGCGGCAA GCCCGGCTTC AAGGGCGGTG ACCGCGACGG CGCCAGGGGC GATTTCAAGG GCGGCGCGAA AGGTGGCCCG CGGGGCGACT TCAAGCCCGG TGGCGGCGGC CGGCCTGGTG GGCGCCCGGG CGGACGTCCC GGCGGCAAGC CCGGCGGTGC CCCCGGGGGA CGCCCCGGCG GTGGCGGCAA GCCGGCACCG CGCGGGGGCG GCCGTCCGAG CCGTCCGCCG CGTGGCGAGG GCTAA
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Protein sequence | MTDIPDPSPA VPADQPAAPE GERIAKAIAR AGIASRRDAE ALIEAGRVTL NGKVLTSPAI NVTDSDRITV DDEPLPARER TRLWLLHKPR GVVTTARDPE GRPTVFDGLP EELPRVVAIG RLDINTEGLL LLTNDGGLAK VIAHPDTGWL RRYRVRAFGD VTQPDLDKLK KGLTVDGMEY GPIEATLDRA QGDNVWLTLG LREGKNREVK RILEHLGLSV NRLIRLSFGP FQLGDLEVGL VEEIRTKVLK DQLGKNLAEQ AGVDFESPVR ETIAPFGSPK KATRATQAAP AGRGRQGARD EGASEPRSGS RGGSAGRPPR DPARPAAPRA GARPAPRPPS PTVWRADEET RPRASKVPRR GMDPKTARAA AAERGRERVG AIQAAGERRV LVERLQPSPE KPAPEPHRRV RFRNEEERSA PRDRAREDRP RQDRPGQDRP REDRPRDDRP RSEGPRENRA RDERPGRDEF RRGAPAGDAR PRRREAGEAA PAERRGPPRE RPSDFEGSPP RERSEGRPQR DFHGDSRERG EGAPRRERPS EGRPPERRGP PRDRPRAAEG ERPARPPRSA EASDRPAFRK GPGKGPGGGA GKSFGGKPGF KGGDRDGARG DFKGGAKGGP RGDFKPGGGG RPGGRPGGRP GGKPGGAPGG RPGGGGKPAP RGGGRPSRPP RGEG
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