| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3553 |
|---|
| Symbol | |
|---|
| ID | 7113686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 3739931 |
|---|
| End bp | 3741838 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643526289 |
|---|
| Product | cobalt chelatase, pCobT subunit |
|---|
| Protein accession | YP_002422301 |
|---|
| Protein GI | 218531485 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
|---|
| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.705599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGA CCAACCGCCC CAAGACCGGC GACCGCAAGG AGCCCGGCGC CGAGCCGCTG
AAGCGCTCGG TGGCCGGCTG CCTGCGCGCC ATCGCCAAGC GGCCCGACAT CGAGGTCACC
TATGCCAGCG ATCGGCCGGC GCTGATCGGC GACAAGGCGC GCCTGCCGGA GCCGACCCGG
CGGATCACCG CCGAGGACGC GGCGATCCTG CGCGGGCATT CCGATTCCAT GGCCCTGCGC
CTCGGCTGCC ACGACACCAG CGTCCACCGC CGCCTCGCCC CCGACAACGC AGCCGCCCGC
GCGGTCTACG ACGCGGTCGA GCAGGCGCGC GTCGAGGCGA TCGGTTCGCG CCGCCTGGAA
GGCGTGGCCG CCAACATCAC CGCGATGCTG GAGGACCGCT ACCACCGCGG CGGCAAGTAC
GAGAACATCA CCGACCGGGC CGACGCGCCG ATGGAGGATG CCGTCGCGCT GATGGTGCGC
GAGCGCCTCA CCGGCCAGAA GCCGCCGCCC GCCGCCGCCC GGATCGTCGA GCTGTGGCGC
GAACATATCG AGGCACGCGC CGGCAAGAAC CTCGACGGAT TGCTCGGCTC GCTTGAGAAC
CAGCGCCACT TCGCCCGCTC CGTGCGCGAC CTCCTCTCCT CCCTCGACAT GGCCGACGAG
ACGCCCCTCG ATCAGGACGA TGAGAGCGAC GAGGACGAGA ACCAAGCCCA GGACGACGAG
CAGCAGCCGA GCGAGGGCGA GGCGGAGGAG CAGAGCCAGG GCGACCGCGC CGAGATCGAG
GTGACCGACG AGGCCACCGA CGAACTCGAC GAGGGCGCCA CAGAATCCGC CGACGCTCCC
TCCGGCGAGC TGCCGGAGGA AGCCGAGGAC GCCGAGTCGG AGGAGGCCTC CGAATCCTGG
CGCCCGCCGA GCCAGCGCGG CAACGAGCGC ACCGGCCCCG ACTACAAGGT CTACAACCCG
CGCTTCGACG AGACCGTCGA GGCCGAGGAT CTGTGCGACG CCGAGGAACT CGCGCGCCTG
CGCAGCTATC TCGACAAGCA GCTCGCCCAC CTCCAGGGCG TCGTCGGCCG CCTCGCCAAC
CGTCTCCAGC GCCGCCTGCT GGCGCAGCAG AGCCGCGCCT GGGATTTCGA TCTCGAAGAG
GGCCAGCTCG ATCCGGCCCG CCTCGTTCGC GTCGTCACCG ATCCGTTTCA GCCGCTCTCC
TTCAAGCAGG AGAAGGACAC CGACTTCCGC GACACGGTGG TCACGCTGCT GCTCGACAAT
TCCGGTTCGA TGCGTGGGCG CCCGATCACC GTGGCCGCGA CCTGCGCCGA CATTCTCGCG
CGCACGCTGG AGCGCTGCGG CGTGAAGGTC GAGATTCTCG GCTTCACCAC CCGCGCCTGG
AAGGGCGGCC AGTCCCGCGA GGCGTGGCTT GCCGGCGGCA AGCCGCCCGC CCCCGGCCGC
CTCAACGACC TGCGTCACAT CATCTACAAG AGCGCCGACG CCCCCTGGCG CCGTGCGCGA
AAGAACCTCG GGCTGATGAT GCGCGAGGGG CTCCTGAAGG AGAACATCGA CGGCGAGGCA
CTGGATTGGG CCCACAAGCG CCTGCTGGCG CGGCCCGAGC AGCGCCGCAT CCTGATGGTG
ATTTCCGATG GTGCGCCGGT CGACGACTCG ACGCTCTCGG TCAATCCCGG CAACTACCTC
GAGCGCCACC TGCGCTACAT GATCGAGGAG ATCGAGACCC GCTCACCGGT CGAACTTCTG
GCCATCGGCA TCGGCCACGA CGTGACGCGC TACTACCGCC GTGCCGTGAC GATCATCGAC
GCCGAGGAAC TCGGCGGCGC GATGACGGAA AAGCTCGCCG AGCTGTTCGA GGAGAACACG
GGCGCGTCGC GCGGCGGCGG GATGAAGCGG GTCGCCGGTC GGCGCTGA
|
|---|
| Protein sequence | MALTNRPKTG DRKEPGAEPL KRSVAGCLRA IAKRPDIEVT YASDRPALIG DKARLPEPTR
RITAEDAAIL RGHSDSMALR LGCHDTSVHR RLAPDNAAAR AVYDAVEQAR VEAIGSRRLE
GVAANITAML EDRYHRGGKY ENITDRADAP MEDAVALMVR ERLTGQKPPP AAARIVELWR
EHIEARAGKN LDGLLGSLEN QRHFARSVRD LLSSLDMADE TPLDQDDESD EDENQAQDDE
QQPSEGEAEE QSQGDRAEIE VTDEATDELD EGATESADAP SGELPEEAED AESEEASESW
RPPSQRGNER TGPDYKVYNP RFDETVEAED LCDAEELARL RSYLDKQLAH LQGVVGRLAN
RLQRRLLAQQ SRAWDFDLEE GQLDPARLVR VVTDPFQPLS FKQEKDTDFR DTVVTLLLDN
SGSMRGRPIT VAATCADILA RTLERCGVKV EILGFTTRAW KGGQSREAWL AGGKPPAPGR
LNDLRHIIYK SADAPWRRAR KNLGLMMREG LLKENIDGEA LDWAHKRLLA RPEQRRILMV
ISDGAPVDDS TLSVNPGNYL ERHLRYMIEE IETRSPVELL AIGIGHDVTR YYRRAVTIID
AEELGGAMTE KLAELFEENT GASRGGGMKR VAGRR
|
|---|
| |