| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3190 |
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| Symbol | |
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| ID | 7114189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 3371033 |
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| End bp | 3372343 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643525941 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_002421956 |
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| Protein GI | 218531140 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.728246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.268471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTC CCCAGGAGAT CATCCGCGAC AAGCGCGACG GACACGCGCT GTCGGAGGCC
GACATCGCCG GCTTCATCGA GGGGCTGACG CAGGATCAGG TCACCGAGGG GCAGGCCGCG
GCGTTTGCCA TGGCAGTGTT CTTCCGCGGC CTCTCGCTCG ACGAGCGCGT GGCGCTGACC
CGCGCCATGA CGCATTCGGG CACGGTGCTC GCGTGGGATC TGCCCGGCCC CGTCCTCGAC
AAGCACTCCA CCGGCGGCGT CGGTGACACC GTAAGCCTTC CGCTCGCGGC GATGGTCTCC
GCCTGCGGCG GCTACGTGCC GATGATCTCC GGGCGCGGCC TGGGGCATAC CGGCGGCACG
CTGGACAAGC TCGCGAGCAT CCCCGGCTAC GACGTGACGC CGGGCCTCGA TCGCTTCCGC
AAGGTCACGG CCGAGGCCGG CTGCGCCATC ATCGGCCAGA CCGCCGAGCT CGCGCCGGCC
GACCGGCGCC TGTACGCGAT CCGCGACGTC ACCGGGACGG TGGAATCGCT CGATCTTATC
ACCGCATCGA TCCTGTCGAA GAAGCTCGCG GCGGGGCTCC AGGGCCTCGT CATGGATGTG
AAGACCGGCT CCGGCGCCTT CATGGCCCGC CGCGAGGATG CGCGGGCGCT TGCCGACAGC
ATCGTAACGG TCGCGAACGC GGCGGGCTTG CGCACGCGCG CGCTCATCAC CGACATGGAT
GCCCCGCTGG CCTCCTGCGC CGGCAACGCG GTCGAGGTGG CCTATGCCGT CGATTACCTC
ACCGGTCGCG CCCGCGAACC GCGCTTCCAC GCCGTGACGA TGGCGCTGGC CGTCGAGATG
CTGGTGATCG GGGGGCTGGC TGCAAACATC GCGGAGGCAG AGGGGCGGCT GACGGCGGCG
CTCGAATCGG GCCGGGCCTG CGAGGCCTTC GCACGGATGG TGGCGGCGCT GGGCGGCCCC
GGTGACTTCA TCGAGGCAGC GGACCGGCAC CTGCCCCGGG CGCCGGTCGT GCGGCCGGTG
CCGGCGCAGG AAGCGGGCGT GGTGGAGGCG GTGGAGACCC GCGCCATCGG CCTCGCGGTG
ATCGGCCTCG GCGGCGGGCG CACCCGGCCG CAGGACGCCA TCGACGCCCG CGTCGGTTTC
ACCGGCCTCG CGCGGCCGGG CGACCAACTG TCACCGAACG ATCCGATCGG CATCGTCCAC
GCCGCGGACG AGGCCGCCGC CGAGCGGGCA GCGGCATCGC TCCGGGCGGC CTATCGGATC
GGTGCAACGC CGCCGGAGCC ACGCGCGGCC GTAGGGGAGC GTTTGGGCTG A
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| Protein sequence | MRLPQEIIRD KRDGHALSEA DIAGFIEGLT QDQVTEGQAA AFAMAVFFRG LSLDERVALT
RAMTHSGTVL AWDLPGPVLD KHSTGGVGDT VSLPLAAMVS ACGGYVPMIS GRGLGHTGGT
LDKLASIPGY DVTPGLDRFR KVTAEAGCAI IGQTAELAPA DRRLYAIRDV TGTVESLDLI
TASILSKKLA AGLQGLVMDV KTGSGAFMAR REDARALADS IVTVANAAGL RTRALITDMD
APLASCAGNA VEVAYAVDYL TGRAREPRFH AVTMALAVEM LVIGGLAANI AEAEGRLTAA
LESGRACEAF ARMVAALGGP GDFIEAADRH LPRAPVVRPV PAQEAGVVEA VETRAIGLAV
IGLGGGRTRP QDAIDARVGF TGLARPGDQL SPNDPIGIVH AADEAAAERA AASLRAAYRI
GATPPEPRAA VGERLG
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