Gene Mchl_2221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2221 
Symbol 
ID7114693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2325939 
End bp2326607 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content72% 
IMG OID643524971 
Producthypothetical protein 
Protein accessionYP_002420996 
Protein GI218530180 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.724367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCCCT GGGAGCACCT CGACACTGCC GCGATCCCCG GTGAAGCGGG CAGCTTGCGC 
CTGATGCGCC GGGGCAGCGA GTTCTCGATT CAGCTCGACC GCAACGAACT CATGAACAGC
CGTCTCAGCG GCTCCGAGGA GGCGCTGGCA CGGCTCTCGG CCGAACGGAT CGCGGGGGTG
AAGGCGCCGC GCGTGCTGAT CGGCGGCTAC GGCATGGGCT TCACCCTGCG CGCCGCCCTG
AGCCTTCTGC CGGGCACGGC GCAGGTGAGC GTGGCCGAGA TCGTCCCGGT GGTGCTCGCC
TGGGCGCGTG GTCCGATGGC GGAGCTGACC GGCGGCAGCC TGGATGACCC GCGGGTCTCA
ATCCGTGAAG CCGACGTCGC CGCGGTGATC CGCGAGCGTC CGGGCGTCTG GGACGCGATC
CTGCTCGATG TGGATAACGG CCCCGATGGC CTCACCCGCA GCGCCAACGA CCGTCTCTAC
GACGCCGCCG GCCTCGGTGC CGCGCGCGCG GCGCTCCGCC CCCGCGGGGT GCTGGCGGTC
TGGTCAGCGC ATCCCGATGC CGCTTTCAGC CGGCGGCTCG CACAGGCGGG GTTTTCGGTC
GAGGAGGTCG GCACTCGGGC ACGCGGCAAG CGCGGGGCGC GGCATGTGAT CTGGCTGGCC
CGGCGCTGA
 
Protein sequence
MIPWEHLDTA AIPGEAGSLR LMRRGSEFSI QLDRNELMNS RLSGSEEALA RLSAERIAGV 
KAPRVLIGGY GMGFTLRAAL SLLPGTAQVS VAEIVPVVLA WARGPMAELT GGSLDDPRVS
IREADVAAVI RERPGVWDAI LLDVDNGPDG LTRSANDRLY DAAGLGAARA ALRPRGVLAV
WSAHPDAAFS RRLAQAGFSV EEVGTRARGK RGARHVIWLA RR