| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1805 |
|---|
| Symbol | |
|---|
| ID | 7114600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 1859153 |
|---|
| End bp | 1859677 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643524569 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_002420596 |
|---|
| Protein GI | 218529780 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0770622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGATC ACCCCGACAC GGATCTGCCG ACCCGCGACA TCGCCCGCGC CCTAGTCTTC
GATCCTTCGA ACCGCCTTCT CCTGATCGAG TACGAGGCGG TGCGCCCGAT CGATCCGGCC
GATCCCGATG CCCGCGGCTT CTGGTTCATG CCCGGCGGCG GGCTGGAGCC GGGCGAGAGC
CACGAGGAGG CCTGCCGGCG CGAACTTTCC GAGGAGATCG GCGTCGCGGA GGTGGAACTC
GGACCCTGCG TCGCCGTCTG CGACGGGCCG TTCCACCTGT TCCGCAAGCC GCGTCATGCC
CGCGAGCGCT ACTTCGTGGT CCGACTCGCG AGCGACCGCG TCGATACCAG CCGGCTGGCC
GAGACCGAGG ACAATCCCGT CCGCGGCACC CGCTGGTGGC CGCTCGATGA ACTCGCCGCT
TCGGCCGAGC GTGTCGAGCC CGCGGGACTG GCCAAGCTGG CGCAACGAAT CGCCGCTGGC
GACGTTCCGG ACCAGCCCGT CCGCCTGACT TGGCGGGACG CTTGA
|
|---|
| Protein sequence | MTDHPDTDLP TRDIARALVF DPSNRLLLIE YEAVRPIDPA DPDARGFWFM PGGGLEPGES
HEEACRRELS EEIGVAEVEL GPCVAVCDGP FHLFRKPRHA RERYFVVRLA SDRVDTSRLA
ETEDNPVRGT RWWPLDELAA SAERVEPAGL AKLAQRIAAG DVPDQPVRLT WRDA
|
|---|
| |