Gene Mchl_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1360 
Symbol 
ID7116333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1401123 
End bp1402364 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content64% 
IMG OID643524135 
Producturea ABC transporter, urea binding protein 
Protein accessionYP_002420170 
Protein GI218529354 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR03407] urea ABC transporter, urea binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.396806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGC GTGACCGAAA CGACGCCCAC TTCCATCTCC GCCGCCGGCT TCTGCTCGGC 
CTTGCCGCCT CTCCGCTGCT AAGTGCCCTG CCCGGACGTG CTCTTGCGCA GACCGGCGCG
GGCGCGCTCG CCGTCACCGA CAAGGAGGTG ACCATCGGCA TCCTGCACTC GATCAGCGGC
ACCATGGCGA TGTCCGAGAC CGGGGCGACG CAAGGGGAAA GGCTCGCCAT CGAACAGATC
AATGCGAGCG GCGGCATCCT CGGCCGCACC GTGAAGGTGA TCCAGGAGGA CGGCGCCTCC
GACTGGCCGA CCTTTGCCGA GAAGGCGCGC AAGCTCGTCG TCAACGACCA TTGCGCGGCG
GTGTTCGGCT GCGTGACCTC AGCCTCGCGC AAGGCGGTGC TGCCGGTCTT CGAGCAGTAT
AACGGCCTCC TGTACTATCC GACCTATTAC GAGGGCCTGG AGCAGTCCAA GAACGTGATC
TACACCGGCC AGGAGGCGAC CCAGCAGACG CTCGTCGCCC TCGACTGGGT GGCGAAGGAG
AAGGGCGCCA AATCCTTCTT CATGGTCGGC TCGGACTATA TCTGGCCGCG CACCACCAAC
AAGATTGCGA CCAAGCACAT CACCAACGTG ACCAAGGGCA CGATCGTCGG CGAGGAATAC
TTCCCGCTCG GGCACACGCA GTTCAACTCG GTCATCAACA AGATCAAGCT CAAGAAGCCG
GACGTCATCT TCGCCACCGT CGTCGGCGGC TCGAACGTCG CCTTCTACAA GCAGCTCAAG
GCGGCCGGCA TCGACCTCAA GAAGCAGACG CTGGTGACGG TGTCCGTGAC CGAGGACGAC
GTCGACGGCA TCGGCGGCGA GAACATCGCC GATGCCTATA GCTGCATGAA GTACTTCCAG
TCGGTCAAGA CTCCGGCCAA CGAGGCCTTC GTCGCCGCCT TCAAGAAGCG CTGGGGCGAC
AAGACCGTCA TCGGCGACAT CACCCAGGCC GCCTATCTCA GCCCCTTCCT GTGGAAGGCG
GCGGTGGAGA AAGCCGGTTC CTTCGAGGTC GATAAGGTGA TCGCCGTTTC ACCGGGCCTC
GAGATCAAGG ATGCACCGGA AGGCGCCGTG AAGATCCACG AGAACCATCA CCTCTGGGCC
AAGACCCGCG TCGCCCGCGC CCGACCGGAC GGGCAGTTCG ATGTGGTCTA CGAGAGCCCG
GAGCTGATCG AGCCGAACCC GTTCCCGAAG GGATATCAGT AG
 
Protein sequence
MRSRDRNDAH FHLRRRLLLG LAASPLLSAL PGRALAQTGA GALAVTDKEV TIGILHSISG 
TMAMSETGAT QGERLAIEQI NASGGILGRT VKVIQEDGAS DWPTFAEKAR KLVVNDHCAA
VFGCVTSASR KAVLPVFEQY NGLLYYPTYY EGLEQSKNVI YTGQEATQQT LVALDWVAKE
KGAKSFFMVG SDYIWPRTTN KIATKHITNV TKGTIVGEEY FPLGHTQFNS VINKIKLKKP
DVIFATVVGG SNVAFYKQLK AAGIDLKKQT LVTVSVTEDD VDGIGGENIA DAYSCMKYFQ
SVKTPANEAF VAAFKKRWGD KTVIGDITQA AYLSPFLWKA AVEKAGSFEV DKVIAVSPGL
EIKDAPEGAV KIHENHHLWA KTRVARARPD GQFDVVYESP ELIEPNPFPK GYQ