Gene Mchl_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1025 
Symbol 
ID7118528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1046975 
End bp1047529 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID643523821 
ProductRNA polymerase sigma factor 
Protein accessionYP_002419863 
Protein GI218529047 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGGTC AGGAAAACGA GTTGCGGGCG TTGCTGTCAT CAGGCCTCGC CGGAAGCACG 
ACGGACTACC GCTTGTTCCT GGAGCGGCTC GGCCCGCACT TGAGGGCCTA CTTCAAGGGT
AAGCTTACGC GCGCCGGACG CGCCGCTCCG GAGGCTGAGG ATCTCGTCCA GGAAACGCTG
ATGGCGGTCC ACACACGGCG ACATACCTAC GATGTCGGGC AGCCGGTCAC GCCCTGGCTC
TACGCCATCG CGCGGTACAA ACTCATCGAC CACTTGAGGC GTACGCGTGC CTCGCTCGCC
GATTTGCCCG TAGAGGACGC TGGTGAGCTG GTCGCACACG ACGACCACGC CGCCGTCGAG
AGCACGCTCG ACGTCGAGCG TTTACTGGCT CGCCTCCCAG TCAAGATGCA ACAGGCGATC
CGATCCATGA AGGTGGAAGG CCTGAGCGCG GCCGAGGCCG CGACGCGCTC CGGCACGTCG
GAATCGGCCA TCAAAGTCAG CGTCCACCGC GGGTTGAAGG CGATGGCCGC CTTGGCAGGA
GGGACACGAC AGTGA
 
Protein sequence
MIGQENELRA LLSSGLAGST TDYRLFLERL GPHLRAYFKG KLTRAGRAAP EAEDLVQETL 
MAVHTRRHTY DVGQPVTPWL YAIARYKLID HLRRTRASLA DLPVEDAGEL VAHDDHAAVE
STLDVERLLA RLPVKMQQAI RSMKVEGLSA AEAATRSGTS ESAIKVSVHR GLKAMAALAG
GTRQ