Gene Mchl_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0726 
Symbol 
ID7116579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp721169 
End bp722062 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content73% 
IMG OID643523518 
Producthistone deacetylase superfamily 
Protein accessionYP_002419575 
Protein GI218528759 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCCCGA TCGTGTTCCA TCCGGCCTAC GAGGCCGAAC TGCCGGAAGG CCACCGCTTT 
CCGATGCGCA AATACGGCCG GCTCGCCGAA ATTCTGCGCG CCCGCGGCCT CGTGCCGGAC
GGCTTCGTCA CGCCGGAGCC CGCCGACGCG GCGCTGCTCT CGGGCGCGCA TGATCCGGCC
TATGTCGCCG CGGTGCTCGC CGCGCAGGTG CCGCGGGCGA TCGAGCGGGC GATCGGCCTG
CCGGTGACGG AGGCGGTCGC CGCCCGCGCC TGCGCCTCGG CCGGCGGAAC GCTGCGCGCC
GCGCGCCTCG CACTCAGCCA CGGGCTCGCC GGCAGCACGG CCGGCGGCAG CCACCACGCG
CGGCGGGCCG GCGGCGCAGG GTTCTGCGTG TTCAACGACG TGGCGGTGGC CGCCCTCGCC
CTGAGACGCG AGGGCGCGAT CACCCGGGCG CTGATCGTCG ATCTCGACGT GCACCAGGGC
GACGGCACCG CCGACTGTCT CGCCCGCGAG CCCGACCTGT TCACGCTCTC GATCCACTGC
GAGCGCAACT ATCCGCACGA CAAGGTGCCC GGCGACCTCG ATATCGGCCT GCCCGTCGGG
CTCGACGATG CGGAATATTG CGCGGTGCTG GAGGCGCGCC TGCCCGCGCT GATCCAGAAC
TTCGCGCCGG ACCTGATCTT CTACAATGCC GGCGTCGATC CCCATCGCGA CGACCGGCTC
GGCCGCCTCT GCCTCACCGA TGCGGGGCTG CTCGCCCGCG ACCGCTACGT GGTCGGCCTC
GCGCAGTCGC AGCGGATTCC GCTCTGCGCC GTGATCGGCG GCGGCTATGG CAACGACGTC
GACGCCCTAG CCGCGCGCCA CGCCCTCGTC TTCGAGGCGA TGGCGGCAGC TTGA
 
Protein sequence
MIPIVFHPAY EAELPEGHRF PMRKYGRLAE ILRARGLVPD GFVTPEPADA ALLSGAHDPA 
YVAAVLAAQV PRAIERAIGL PVTEAVAARA CASAGGTLRA ARLALSHGLA GSTAGGSHHA
RRAGGAGFCV FNDVAVAALA LRREGAITRA LIVDLDVHQG DGTADCLARE PDLFTLSIHC
ERNYPHDKVP GDLDIGLPVG LDDAEYCAVL EARLPALIQN FAPDLIFYNA GVDPHRDDRL
GRLCLTDAGL LARDRYVVGL AQSQRIPLCA VIGGGYGNDV DALAARHALV FEAMAAA