| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_0534 |
|---|
| Symbol | |
|---|
| ID | 7114690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 530059 |
|---|
| End bp | 530844 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643523330 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002419394 |
|---|
| Protein GI | 218528578 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.913687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCT CGCGCACTAG GCGGCATATC GCTAGTGACG CCACCGACGG TATCTTCGTC
TGCCGTCAGT TCAGCGGACG ATTGGTGCTG GAGCAGGACG GCTATCAGGT CGGACTGGAG
CCCGGGGACG TCACATTGCT CGACCCGGCT GTACCCTACG CGGCCCATTT CTTCGGTGGC
TCCGAACTGC TTGTGTTCAA GGTCCGGCGC AACGCTCTGG AGGGGCGCGT CGGGAGGACG
CGCGCGTTGA CCGCGCGCGC ACTGCCGGCG AATGCAGACG GCCGGCTAAC ATCCGCCTAT
CTTGGCCTGC TCCCCTTCCA CGCTAACGGG CTCAGCGCGG CGGTAGGAGC AAGCGTCGAG
CCGCAACTTC TGGACCTCAT TGCCCTCTCG TTTAGCCGGG CGCTCGCCGG GACAGCGGCG
CGGGGCTCCT CGGCGCGCTC TTTGGCCCGC ACGAGGGTGC GCGCGGCGGT CGAGGCCAAC
CTATGCGATC GGAGTTTCGG GGTGGCCGCC GTCGCCCAAG CAGCGGGCGT CAGCATTCGG
TACGCCAACG CCGTGCTGGC GGATGAAAGT ACCTCAATCA TGCAACTCCT TCAGACGCGG
CGTCTGGAGC GTTGCCGGCA GGCGCTCGCA GACCCGGCGC AGGCGGATCG GAAGGTGAGC
GAGATTGCAT ATGGCTGGGG GTTCTCAGAC ATGAGCCACT TCGGACGCCG GTTCAGAGCA
CTATTCGGCA TGCTACCCAG CGAGTTCCGG CGTAGCACGC AGATGGCTTC CACTCGGCAC
CTGTAA
|
|---|
| Protein sequence | MTVSRTRRHI ASDATDGIFV CRQFSGRLVL EQDGYQVGLE PGDVTLLDPA VPYAAHFFGG
SELLVFKVRR NALEGRVGRT RALTARALPA NADGRLTSAY LGLLPFHANG LSAAVGASVE
PQLLDLIALS FSRALAGTAA RGSSARSLAR TRVRAAVEAN LCDRSFGVAA VAQAAGVSIR
YANAVLADES TSIMQLLQTR RLERCRQALA DPAQADRKVS EIAYGWGFSD MSHFGRRFRA
LFGMLPSEFR RSTQMASTRH L
|
|---|
| |