Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1913 |
Symbol | |
ID | 3997705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 2004608 |
End bp | 2005624 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637959656 |
Product | flap endonuclease-1 |
Protein accession | YP_566545 |
Protein GI | 91773853 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTACGG ATATTGGTGA TCTACTTCTT AAGGATACGA TCGAGATAGC TGGCCTTTCA AATAAAGTAG TGGCTATCGA TGCGTATAAT ACTCTTTATC AGTTCTTAAG TATAATCCGG CAACGTGACG GAACCCCTTT AAAGGATTCC AGGGGTCAGA TCACTTCTCA TCTTTCGGGT ATCCTTTATA GGCTTACCAG TCTCATCGAA GCAGGTGTCA AACCTATTTT TGTCTTTGAT GGCAAGCCTC CTGATTTCAA ATCTGACACT CTGGCAAAAC GGCATGAGGT CCGGGAAAGT GCAACTGCTA AATGGGAAGA TGCAAAAGCG CAGGGGCTTG AGGAAGAAGC CTACAAGTAT GCACAGGCCT CCTCAAAAGT GACCCGTGAG ATGATCGATG ATTCTGTCAG ACTATTGGAA TTGATGGGTA TCCCTTATGT GAAAGCACCC TCTGAGGGAG AGGCACAGGC CTCATACATG GTGCAAAAAG GGGATGCTGA TTATATCGGT TCACAGGACT ATGATTCTTT TCTTTTCGGT GCACCACAGG TTGTTCGAAA TCTCACTATT ACCGGTAAGC GAAAGCTTCC AAAAAAGAAC ATCTACGTGG ATGTTAAACC CGAGGTCTTG TCCCTTGTGG ATTCCCTTGG GGAACTTGGC ATTACAAGAC AGCAATTGAT CGATATTGCC ATGTGTGTGG GCACAGATTA TAATACCGGT CTCGAGAACA TCGGTCCGAA AAGAGCGCTT AAACTGGTGA AGGAACACGG CGATATAAAA GTTGTACTCA AAGAACTTGG TAAAGATATC GAAGACCTTG ATGCTAAAAG AGATTTCTTC ATGAACCCGC CCGTAACAGA CGATTATGAA CTGAAATGGA TCAAGCCTGA TCGTGCCGGG GTAATTGATC TTCTCTGCAA AAAACATGAT TTTTCAGAGG AGAGGGTCAA TAAAGCACTT GACCGCCTTG AAGCTAACAT AGGCGGCAGT CAAAGCACTC TTGATCAATG GTTTTAA
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Protein sequence | MGTDIGDLLL KDTIEIAGLS NKVVAIDAYN TLYQFLSIIR QRDGTPLKDS RGQITSHLSG ILYRLTSLIE AGVKPIFVFD GKPPDFKSDT LAKRHEVRES ATAKWEDAKA QGLEEEAYKY AQASSKVTRE MIDDSVRLLE LMGIPYVKAP SEGEAQASYM VQKGDADYIG SQDYDSFLFG APQVVRNLTI TGKRKLPKKN IYVDVKPEVL SLVDSLGELG ITRQQLIDIA MCVGTDYNTG LENIGPKRAL KLVKEHGDIK VVLKELGKDI EDLDAKRDFF MNPPVTDDYE LKWIKPDRAG VIDLLCKKHD FSEERVNKAL DRLEANIGGS QSTLDQWF
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