| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1125 |
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| Symbol | |
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| ID | 3997732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 1207778 |
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| End bp | 1210420 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637958893 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_565801 |
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| Protein GI | 91773109 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3
[TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00422902 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCTG ATAGCTTTAA GGAACTATAT GATAATCTCT ATAAGGGATT AATAGTTCCA
AAAAGCTATT ATTCTGCTCA TAGAAATGAA AGTGGTATAG AATTATTGGA AGATCATTCT
CAACTTTGTG GGAATTATTT TCTTTATTTT ATTGAGAATT TGGAACTTGA ACCTTTAATT
GATAATTTGA TTATTGACTT ATTTGGTAAA AATAATTTGT TGAGTATAAA ACAAATTCTG
TTATTTGCTG TTTATTACCA TGATATTGGT AAAATAAATT CTAATTTTCA AAAGGTGAAA
GTGAATAGTA AAAAATCATC CAGCAATAGT AACCATAGTA TTTTTTCGGA AAAAGTACTT
ACATCATTTT TGCTGAATGA ATTTCCCAAT CAAAAATCGA TTATTTATTT GATAGGAACT
GTTGTTTCGT TACATCATAC AAAATTAAGA GATTTTAGTA TAAAGGATTA TGATGAAAGC
CAAGATGAAA TTAAAATTAT TCAACAAATT ATTCAGGATA CAGGACTTGA AATAAAAGAG
ATTTCTAAGG ATGAGAAATT TGATTTTTAT TCTGATAATT ATAGTCGGGA TAAAATCTTT
ATTTTTGTGA AGCTTTTTTA TTCTTTACTT GTACTGAGTG ATTCATATTC ATCAATGCAT
TATGCTAATT CTATGAAATC AATGCATCCT CTAAATGTTA TTGATTCTGA AATTCGTGAA
AAAATGATTA AGTCATATTC TGGAGTTTCA TACAATGCAA ATATTGATGA TATCACTTCA
GGTGATATTT CTAGCTGTAA CAATATCAAT GAGTTACGCA AAGAGATTTT AGTTGAATGC
AATGATAATA TGAAGAGACT GGTAAAGGAT GGCAATAAAA TATTTATGTT GTCTGTGCCA
ACAGGTGGCG GAAAAACTAA TATTTCTATG AAATTGGTTT TGAATATTCT TGAACATGAT
AATTCGTTGA AACGTATTTT TTATGTTTTT CCATTCATAA ATATTATTGA GCAAAATTAT
AAATCAATTG ATAATACGTT ATTTAATGAT AGTTATTTTC CAAATAAGTT AGGTCTGATT
TCAGATATTT ATTCACGTGC ATATGTAAAT AAATACGAAA ATATGTCTGA TACAGATGAT
TCTGATTTTA AGTTAGAGCA GATGTTATTA ATTCAAAATG ATAATTTTTT GAATAATTGT
GTTAATGTTA TTTCCAATGT TAATTTTTTC AATTCGTTTA TTAAAAATGG TGGCAATAAT
CGTTATAAGA TTGCAAATAT GTGTAATAGT GTTGTTGTTA TTGATGAAAT ACAAACATTG
AGCGATAAAA ATATTCGGAC ATTTTATAAT TTTATAAAAG AAACTAGTGA ATCGCTAAAT
ATTTATTATA TAATTATGAG TGCTACATTA CCAGATTTTA ATTATTTTTT AGATAATGTT
ACTATTCCTC AGGTAATTAA TAATCCTCTT AAATATTATA ACCATCCAAT TTTTAAGCGT
AATTCAATAA TTTTCAAGAA GAATTCTAAC GATATTGATT CGATAAAGAA GTTGTTGATT
GAAGAGATTA AAGTAAATTA TGCCACTGGA GGCGTAAAGG TTCTTATTAC TTTAAATGTG
GTTGATACTT CTAGAAGAGT TTTTGATGAA TTGAGAATTG ATGATGATTT TAATGGTTTT
TCATTTTATC TTCTAAATAG TACAACTTCA ACTTTGCGTA GGAAAAAAAT AATTGAAAAT
ATAAAAAAAT GTCCGAACGG TGAGCGTATT ATAATTGTGT CAACACAATC CATTGAAGCA
GGGGTGGATA TTGACTGTGA TTTTGGAATT CGTGATTATT CTATTTTGGA TAGTATCGAG
CAAATATCTG GACGTATTAA TCGAGAGTGT GATGCACAAA AAGCAGATAT TTCTAAATTA
TTTGTGATTA AATACAAAGA TGGGGATACA GCCGATTCTA AAAAGATATA TGGTAATCAA
GAGCGATATA AAATATTGAA TAATATGGAA GATGGGATGG AGGAAGAAAT TCTTTCGACA
AAACATTTTG ATACATATTA TGGCAAGTTG TCTGAGGAAG TTAAGAAAAT TGCAAGGGAT
AATTTTAAAC CAATTCAGGG CAAAATTGCA AATTTACAGT ATCAATCTAT AAATAATGAA
TTGGATGTAA TTGATACTAA GGTTGGAAAA GTTGATATTT TCATTTGTGA TGAGATTCCG
CTTAATAATT TATCCAAGTA TGACCGAGAA AAGATTAGGG CATTGATAAA TGATCCTCGA
ATTGTGAATG CAGAAAAAGA TGCTAAAATT ATAATTGATG ATGTTATAAT TTCAAGCAAT
GTTTATGTGG TCTGGAAGGA GATTCTTAGT TCGACTAATA AATTTGAAGA TGTGTATATT
AGAAGAAAAA TAACGAGTTT GTTTAATCAA TTTGTTATTT CAATTACTAA TATCAAAAAT
AATGCATATG ATTCGGATTT ATTTGATTTT CTTCAAACTG AGGGATTTGT TGAGGTGGAT
GAGCGTTTTG ATGTTGTTTT ATCAACTCCG AAGTTTTTAG AGTACTATTC ATTTGATGAT
GGTCTTAAGT CATATGAGAT TAAGGAAGCA ATTAATAATC GATCAATGGG TGTAATTTTA
TAA
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| Protein sequence | MYSDSFKELY DNLYKGLIVP KSYYSAHRNE SGIELLEDHS QLCGNYFLYF IENLELEPLI
DNLIIDLFGK NNLLSIKQIL LFAVYYHDIG KINSNFQKVK VNSKKSSSNS NHSIFSEKVL
TSFLLNEFPN QKSIIYLIGT VVSLHHTKLR DFSIKDYDES QDEIKIIQQI IQDTGLEIKE
ISKDEKFDFY SDNYSRDKIF IFVKLFYSLL VLSDSYSSMH YANSMKSMHP LNVIDSEIRE
KMIKSYSGVS YNANIDDITS GDISSCNNIN ELRKEILVEC NDNMKRLVKD GNKIFMLSVP
TGGGKTNISM KLVLNILEHD NSLKRIFYVF PFINIIEQNY KSIDNTLFND SYFPNKLGLI
SDIYSRAYVN KYENMSDTDD SDFKLEQMLL IQNDNFLNNC VNVISNVNFF NSFIKNGGNN
RYKIANMCNS VVVIDEIQTL SDKNIRTFYN FIKETSESLN IYYIIMSATL PDFNYFLDNV
TIPQVINNPL KYYNHPIFKR NSIIFKKNSN DIDSIKKLLI EEIKVNYATG GVKVLITLNV
VDTSRRVFDE LRIDDDFNGF SFYLLNSTTS TLRRKKIIEN IKKCPNGERI IIVSTQSIEA
GVDIDCDFGI RDYSILDSIE QISGRINREC DAQKADISKL FVIKYKDGDT ADSKKIYGNQ
ERYKILNNME DGMEEEILST KHFDTYYGKL SEEVKKIARD NFKPIQGKIA NLQYQSINNE
LDVIDTKVGK VDIFICDEIP LNNLSKYDRE KIRALINDPR IVNAEKDAKI IIDDVIISSN
VYVVWKEILS STNKFEDVYI RRKITSLFNQ FVISITNIKN NAYDSDLFDF LQTEGFVEVD
ERFDVVLSTP KFLEYYSFDD GLKSYEIKEA INNRSMGVIL
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