| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1075 |
|---|
| Symbol | |
|---|
| ID | 3998012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1153530 |
|---|
| End bp | 1154807 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637958847 |
|---|
| Product | pyruvate carboxyltransferase |
|---|
| Protein accession | YP_565755 |
|---|
| Protein GI | 91773063 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00051273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAT ACAAAACTTA TGAAGATCTT CCAAAGATCA AACTTCCGAA GGGACAGGAA
GTAAGCATAA GTGATAGTAC CCTACGCGAT GGGGCTCAGA TGCCCGGTAT TGTATTAAAG
GTAGATCACA AAGTGAAGAT CTATGAGTAT CTGCACAATA TCGGAATTGA AAAACTTGAG
ACATTTGTGT ATAATGACCG TGACAGAAAC GCCATTAGCA TGATGTTAGA CAGAGGTTAT
GAGTTCCCAG AGGTCACCGG TTGGGCAAGG GCTGCCACCA GTGACATTGA TCTGGTACTG
GATATCGGTG CTATCGAAGA GACAGGAATA TTGATGTCCG TATCAGATGT ACACATATTT
GATAAGATGG GACTGCCAAG CAGGGAAGCT GCCGAGGAAA AATACCTTGA TGCATTACAA
TATGCGGTAG ACCACGGGCT TAGGACACGT GCACATATTG AAGATATGAC ACGTGCGGAT
AACACTAATT TTGTCTATCC AATGATCAAG AAGATCCTTG AGATCGATCC AAAATGCACC
ATCCGTCTTT GTGACACCAT TGGGTTCGGA ATTCCTTTTG TTGATGTTGA AGAACCATTC
GGCATACCCG AGATGGTCAG ACATGTCAAG GAAGAGCTAA AAGCTGTCAA TATCGAGACC
CATTGTCACG ATGATTTCGG TCTTGCTGTG GCAAATTCCA TCGCTGGGTA CTGGCACGGT
GCTAACTGGT CAAATGTGAC TTTCCTCGGC ATCGGCGAAC GTGCAGGTAA TGCTGAATTG
GAGAAGTTGT TGTTATTCCT CGAAAGGAGG ATAGAAGGCT TTGATAAGTA CGATCTCAAA
TCCCTTTTCG AATTTGCTAA ATTCATGGAA AGAGAGATAG GTATCAGGAT CCCAAGGAAC
AAATCCATTG TAGGAAACAA TGTCTTTGCA CACGAATCCG GTATCCACAC AGCAGGCGTC
ATCAAGAACC CATTCACCTA TGAGCCCTAT CCACCGGAAG TAGTTGGAGG AAAGAGGGCT
TTCCTTATAG GCGATTCATC GGGTATTGAA GTTCTGCGTT TCAAGGTAGA GGATACACTT
CATGATCTTC TGGACGTAAA GATCAGTGTT GAAAAGAACG ATCCACGTCT CAGGGCTATC
CAGGCGGATA TACAGAACCT TTACAACAAT GAGAAACGTG TTTCATGCAT TTCCGATGAA
GAGATACAGG CATACGTTGA AAAATACTTC CTCTTCGAGC CTATCGTTGA GAAAAGTATG
GGAAGAAAAA CCCTCTGA
|
|---|
| Protein sequence | MKLYKTYEDL PKIKLPKGQE VSISDSTLRD GAQMPGIVLK VDHKVKIYEY LHNIGIEKLE
TFVYNDRDRN AISMMLDRGY EFPEVTGWAR AATSDIDLVL DIGAIEETGI LMSVSDVHIF
DKMGLPSREA AEEKYLDALQ YAVDHGLRTR AHIEDMTRAD NTNFVYPMIK KILEIDPKCT
IRLCDTIGFG IPFVDVEEPF GIPEMVRHVK EELKAVNIET HCHDDFGLAV ANSIAGYWHG
ANWSNVTFLG IGERAGNAEL EKLLLFLERR IEGFDKYDLK SLFEFAKFME REIGIRIPRN
KSIVGNNVFA HESGIHTAGV IKNPFTYEPY PPEVVGGKRA FLIGDSSGIE VLRFKVEDTL
HDLLDVKISV EKNDPRLRAI QADIQNLYNN EKRVSCISDE EIQAYVEKYF LFEPIVEKSM
GRKTL
|
|---|
| |