| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0439 |
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| Symbol | |
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| ID | 3997634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 427375 |
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| End bp | 429357 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637958256 |
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| Product | glycogen debranching protein |
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| Protein accession | YP_565177 |
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| Protein GI | 91772485 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTCC ATGCAACATA TAATGGTGAA TTTGATCCTA CATCCGCAAT TTTCCGGGAA
TGGCTTATCA CGAACGGCAT TGGAGGCTAT GCATCATCTA CTATTATTGG TGATAATTCA
AGAAAATACC ATGGTCTTCT GATCGCTTCT GCAAATCCTC CGGTTGACCG TAGGGTGTTG
CTTTCTTCCC TTGATGAAGA GATCATTGTT GGAAATAAAG TATATCATCT TGCAGCCCAC
AGGTATCCCG ATACATTGTA TCCTTCAGGT TTCAAATATC TCGAGCGTTT TTCTGCTTCT
CCGCTACCAA CTTTTGAGTA CAGTATTGGG AACATTAAGC TGAAAAAGAA TATCTTCATG
ATCCATGGGC AGAACACCAC AATTGTCAGG TACAAACTAA TAAATCCTGA TAATGAGGAC
CTTGTTTTCC GTATATTGCC TCTTGTGACA AACAGGGATT TCCACCAGCT TAAAAGGGCA
GATGCGATCA GTTTTAGTGA AAGGCATGAT GCTTCAGGAG TTCAGTTGAG AACTGTTGAT
GGTGTTCTGC AACTGCGGTC CAATATGCAA TTTGTTCAGG AACCACACTG GTATTATAAT
TTAGAATATG ATACTGAACG TGAGCGAGGG GAAGCTTATC AGGAAGATCT CTATAACCCT
GGTCATTTTG AAAGACATAT TCTGGATAAA GTGAGTGAAC TATATGTTGT AGCTTCGACC
CCTATTTCAG AAAATATGGA ATTTGACCTT GAACTTGTTA ATTCTGAATA TGAAAGGGAA
CTTTCAAGAT ACAGATCTCT GCAGGACTGC TGCAATTTGA CTGACGATCT CGCAAAGAAG
CTTGTCAATG CTGCAGACGC TTTCATTGTG CATCGCAACT CTACCGCTTC TAAAAGCATC
CTCGCAGGTT ATCACTGGTT TGCGGATTGG GGACGGGATG CGATGATCTC GCTTCCGGGA
CTTACTCTTG TAACAGGAAG GTTCAATGAT GCAAAAGCTA TTCTGACCAC CTTTTCTGAA
CAGTGTTCAC AAGGCCTCAT ACCAAACCGA TTTTCAGATG ACGGGATTTC TCCTACGGAT
TACAATACAG TTGATGCTTC ACTCTGGTTT ATCCATTCCC TTGAGCGATA TTATTCATAT
ACCAGGGATA TCGAATTTGT TAAAAAAATG TGGGATACAG TTGGGTCAAT TCTCCACAAT
TACATAGAAG GGACCTTATA CGGAATCCGT ATGGACGATG ATGGACTAAT TGAACAGAAA
GGTCAGCTTA CCTGGATGGA TGTAAAGATT GGTGATAGGG AGATCACACC AAGAGCTGGA
AAAGCATGCG AGATAAACGC TTTGTGGTAT AATTCCCTCT GTATTGCCAA CTTGTTTGGG
GAATTGATAG GTGCAGACAC AAAACAGTAT CTTGAAATAT CTCGATTGGC CAAAAGCAAC
TTCGTTGATA CTTTCTGGAA TTCAACAGAC AAGTGCCTTT ATGACTGCGT TTCTGTAGAT
GAGGATATGG CTGTCATTAA AGATGCATCC ATCAGGCCTA ACCAGATCTT TGCAGTATCA
CTGCCCTACA CTATGCTTAA TCCTGATAAG GAAAAAATGA TAGTTGAAAA GGTAGTTGAA
GAGCTCCTAA CTCCTTATGG TCTGAGGACC TTATCACCGG CTGACAGCCA GTATATCGGA
AGATACAGAG GTGACCGGGA TTCCCGGGAC CGTGCATATC ATAACGGCAC GGTCTGGCCC
TGGCTACTCG GGCCATTTGT CACTGCATAC ACAAAGGTGC ACAACAGATC TCCCTCAAGT
CTGGAATATT CCAGGCAATT GTTACTCAAT TTTGGACCCC ATTTTGATGA GGCTGGCATA
GGAACGATTT CCGAGATATT TGATGGTGAT ACCCCGCACA GGCCAGATGG ATGCATTTCC
CAAGCATGGA GTGTTGCTGA AATATTACGG GCTTGTGTCG AAGATGTGAA TATTCAAAGT
TAA
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| Protein sequence | MSLHATYNGE FDPTSAIFRE WLITNGIGGY ASSTIIGDNS RKYHGLLIAS ANPPVDRRVL
LSSLDEEIIV GNKVYHLAAH RYPDTLYPSG FKYLERFSAS PLPTFEYSIG NIKLKKNIFM
IHGQNTTIVR YKLINPDNED LVFRILPLVT NRDFHQLKRA DAISFSERHD ASGVQLRTVD
GVLQLRSNMQ FVQEPHWYYN LEYDTERERG EAYQEDLYNP GHFERHILDK VSELYVVAST
PISENMEFDL ELVNSEYERE LSRYRSLQDC CNLTDDLAKK LVNAADAFIV HRNSTASKSI
LAGYHWFADW GRDAMISLPG LTLVTGRFND AKAILTTFSE QCSQGLIPNR FSDDGISPTD
YNTVDASLWF IHSLERYYSY TRDIEFVKKM WDTVGSILHN YIEGTLYGIR MDDDGLIEQK
GQLTWMDVKI GDREITPRAG KACEINALWY NSLCIANLFG ELIGADTKQY LEISRLAKSN
FVDTFWNSTD KCLYDCVSVD EDMAVIKDAS IRPNQIFAVS LPYTMLNPDK EKMIVEKVVE
ELLTPYGLRT LSPADSQYIG RYRGDRDSRD RAYHNGTVWP WLLGPFVTAY TKVHNRSPSS
LEYSRQLLLN FGPHFDEAGI GTISEIFDGD TPHRPDGCIS QAWSVAEILR ACVEDVNIQS
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