| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0253 |
|---|
| Symbol | |
|---|
| ID | 3998748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 227731 |
|---|
| End bp | 228651 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637958088 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_565010 |
|---|
| Protein GI | 91772318 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1955] Archaeal flagella assembly protein J |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0793731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT ATTTCAGTAT AGCTTTTGCG CTCTTTGGTA AATACTATGT GGACAAACGT
TCAAAGTATT TTAATTTGAG GCGGGACCTT CTAAGGTCCA GGCTGAATAT GGGGTATGAC
AGGTATCTTT CTGGCGTTCT TCTCATTTCG ATTCTCGCCA CATTAGGCAT ACTTCTCCTA
TTCTTTTTTG TGATAGTACT CATTGGTGTA CCGGTGATAG AGGCTAATAG ATTTGGTTTT
CCAGCATGGA CTGCTGCTTA TCGTCCTTAC CAGCCTATAC TGGTAGCTGT TTTTGGAGGT
CTATTTTTTG CAGCTTTATG TTTTGTTAGT GTCTATTCAC TATTGAAATC TTATCCTGCT
ATGGTCGCAG GTGACAGAAA ACGTAAGATC GAACAGATGT TGCCTTATGC TATCAACTAT
ATGTCTGCAA TGTCTGGTGC AGGGGTTCTT CCGGTAGATC TTTTCCGTGC TCTTTCAAAC
AATGAGATAT ATGGTGAGAT GTGTGTCGAA TCAAAATATC TTGTGCGTGA TCTGGAAGTT
CTTGGCAGTA ACCTTGTGTC TGCAATGAAG AATCTTGCAT CTTCAACACC CTCTCCGATG
TTACAGGAAT TCCTTCAGGG TGCTATCACA GTTGTAACGT CTGGTGGTGA ACTTGAGTCC
TATTTCAAGA TCAAGGCTGA ACAGTACATA ATTGATAACA GGCAAAAGCA GAAAGAGTTT
TTAGAAACCC TTGGTCTTCT TGGTGAGACA TATGTGACTG CATTTGTCGC AGGTCCTTTG
TTCCTTATTA TTACGATAGC TATCGTATCA CTCATGGGTG GTGCAGATCA GGTATTCCTA
TATATTCTTG TTTATGGTTT GATTCCAGTT GGAAGTGCGA TGTTTCTCGT GATTATAACG
TTAATAACTC CGGAGGAATA A
|
|---|
| Protein sequence | MDKYFSIAFA LFGKYYVDKR SKYFNLRRDL LRSRLNMGYD RYLSGVLLIS ILATLGILLL
FFFVIVLIGV PVIEANRFGF PAWTAAYRPY QPILVAVFGG LFFAALCFVS VYSLLKSYPA
MVAGDRKRKI EQMLPYAINY MSAMSGAGVL PVDLFRALSN NEIYGEMCVE SKYLVRDLEV
LGSNLVSAMK NLASSTPSPM LQEFLQGAIT VVTSGGELES YFKIKAEQYI IDNRQKQKEF
LETLGLLGET YVTAFVAGPL FLIITIAIVS LMGGADQVFL YILVYGLIPV GSAMFLVIIT
LITPEE
|
|---|
| |