| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2385 |
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| Symbol | |
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| ID | 5412108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 2452910 |
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| End bp | 2454742 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640869641 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001405542 |
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| Protein GI | 154151924 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0700595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCC CTGCATTTCT GAAACGGGCC GGGGTGTCGC TCCAGAACGC GGAACTTGTC
ATCCTTGGGA CAAACCTGAA CCGCGACCTC CGGTCTGCCC ATCTATCTTA CACTGCTGAA
CAGTACCTTC GAACGACCCG GATCAACTCC GCTGCCACCA CCCTGATCTT TTTTGCATTT
TTCGGATTTG TCCAGTTCAC CGGCTATGAT TTTGGCCTCT TTGCGCTGAT TCCCCCGCTC
ATTTTCTGGA TCTTTCTGTT TGCCCTTTGT GTACCGGGAA TGTACCTCTT TCAGGTCTAT
TATCCCGTGA TGATCGCACG CGGTAGGAAA TCGAAAATCG ATCTTGACCT GCCGTATGCA
GTCTCGTATA TGCAGGCCCT CTCTACCACG ATGTCGCCAT TCGAGGTCGT AAAGAGGATC
TACGAAGAGA AAGCGATGTT TAATGAGGTC TCGCTTGAAT TCGGGCAGGT GGTTCGGGAC
GTAGAACTCT TCGGCGACGA CCTGATCACC GCGCTACACA ATCTCCAGAA GACCACTCCC
TCACCTCTGT TCCGGGATTT CGTCAACGAT CTCGGGGTGG TTTATGAAAG CGGCGGTGAT
ATTACCGCGT ACCTCTCTGC AAAGACCGAA TTCTTTCACG AACAGGCCAA GAGGGAACTT
GACCTGCTGC TTAAGACCAT CGAGATCATG GCGGAGGTCT ATGTCTCGGC CTTCGTGGCG
GGCCCTATCG CGCTCATTAT TATGATCGTG GCGCAGGGAA TGACCAGCGC TGCGACAATG
ACCTGGCTTG TTCCCTTCAT GTATCTCGTC ATCCCGGTAG GGGCTATTAT TATGATCTGG
ATGCTTTCGC TCATGCTGCC CCCAGAGAAC CTGGAAGTTA CCAGAAGGGA GATGGCCGAT
ACCGGATTGA GTTTCGGGAT TTCGGCCGAT GAGTATCCTT TTCAGGAAGA CCAAGCGTTT
CTCCGGTCCC TCGAAGCCAA ACGGCAGGAG CGCCGGATCT ATAACCTGCT CCGGCATCCG
TTCCGGACCT ACATCTCCAA CTACAATTAC AGCCTGATCG CGGGAGTCAC ATGTGCCGGG
ATATTCGCCC TCACACTTGC ATCCGGTGGC ATGAATGCCC TCTTTCCGAA GAACGCGTAT
GAAGGCGGCG TCTGCCTGAT TGCAATTGGC TTTATGGCCC CGGTTTCCCT TGCGTACGAA
GGACGGCGTT GGTACGTGAT CAATGTCGAG AATAACATTC CTGAGTTCCT GCGGGAACTT
TCCGATATGA TCGATATCGG CCTGACGCTG CCGGATGCGA TCCACCGGAT CTCAAATGCG
AAGCTGGGCC TGCTGAGCTC GGAGCTCGCG ATCGTTTCCC GGGATGTCAG TACGGGGGCG
TATGTCAACT CAGCACTTGT CCGGATGGAA GAGCGGATTG GTGTTATCTC GGTCAAACGT
GCCATATCGC TGCTCGTGAA GGCAAGCGAG GTCACCTCGA ACCTCAGGGA CATTTTCGTT
ATCGCCATTA CGGATTTTGA GCACTACCTC AAACTCAGGA GCGAGCGGGC CAACACTGCC
ATCGTCTACG TGATGATCAT CTACCTCTCG TTTGGGATCT ACCTCTACAC GGCGTACCAA
CTCAACGGGC CCTTTATGTC CAGTTTTTCC TCGTTCAATC TCAATTTTAA TATTGCCCAG
AACGTGACGG AGATGTTTGA TATCGCGATC GCCCTCGGCC TCTTCTCCGG CATCATGGCC
GGCCAGTTCA GCTCAAACAG CATCCTAGCA GGGTTCAAGC ACAGTATTGT CCTACTCGCG
GCAGCAGTGG CCATGTTCGT ATTTATCGTG TGA
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| Protein sequence | MAVPAFLKRA GVSLQNAELV ILGTNLNRDL RSAHLSYTAE QYLRTTRINS AATTLIFFAF
FGFVQFTGYD FGLFALIPPL IFWIFLFALC VPGMYLFQVY YPVMIARGRK SKIDLDLPYA
VSYMQALSTT MSPFEVVKRI YEEKAMFNEV SLEFGQVVRD VELFGDDLIT ALHNLQKTTP
SPLFRDFVND LGVVYESGGD ITAYLSAKTE FFHEQAKREL DLLLKTIEIM AEVYVSAFVA
GPIALIIMIV AQGMTSAATM TWLVPFMYLV IPVGAIIMIW MLSLMLPPEN LEVTRREMAD
TGLSFGISAD EYPFQEDQAF LRSLEAKRQE RRIYNLLRHP FRTYISNYNY SLIAGVTCAG
IFALTLASGG MNALFPKNAY EGGVCLIAIG FMAPVSLAYE GRRWYVINVE NNIPEFLREL
SDMIDIGLTL PDAIHRISNA KLGLLSSELA IVSRDVSTGA YVNSALVRME ERIGVISVKR
AISLLVKASE VTSNLRDIFV IAITDFEHYL KLRSERANTA IVYVMIIYLS FGIYLYTAYQ
LNGPFMSSFS SFNLNFNIAQ NVTEMFDIAI ALGLFSGIMA GQFSSNSILA GFKHSIVLLA
AAVAMFVFIV
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