| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2377 |
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| Symbol | |
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| ID | 5410670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2444579 |
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| End bp | 2446237 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640869633 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001405534 |
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| Protein GI | 154151916 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000449683 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTA CAGTACTCTC CGAAACAAAG ACATACCGTG CCGGTATTAT TTATGCCCTC
TGTATGTCGG GCATCCTGGT TTTCTGTCTT GTTGCCGGAT GCACGAACAG CGTTTCAACG
TCCCCAGATA CCGGAAACCT GACCGGCGTC CCTGCCAATG ATGTCATCAT CCCGGTCGAT
TCCCCATCAT CGCTCATGTA CACCAGCAAC ATGCAGAAAG GCGGTGTCCC GGGAAGCTCG
CTTATTTACG AAGGGCTTGT GATTAAGGAC CGGAACGGCA TCTTCGATCC CGCGCTCGCA
CAGAGATGGA GTGTCTCACC GGATGCAAAG ACCTGGACAT TCGACCTTGT ACAGAACGCT
ACATGGAGCG ACGGCGTTCC TTTCACCTGC AACGAGGTCA AGTTCACCAA CGATTACATG
AAAGCCAACA ACCTGACCAT GGGTTACGTT CTCTCTGACG TACAGTCCGT GGAATGCCCT
GACAATTACA CGGCAGTCTT CAACCTCAAG ACCCCGTACT CCGCATTCCT CGACCAGATC
TCAAGAACCC CGGGGATCAC CATCTCGCCT GCGCATATCT GGCAGAACAT CTCCGATCCC
CAGCATTACA AGGACAACCA GATGATCGGG ACCGGGCCGT TTGTCTTTGC CCAGGCAGCT
CCCGGGTATT ACCAGTTTTC CACCAATGAA AATTACCACG GGCGGGTTCC CACTATCCCC
GGTGTGGTTC TCAAGGTGAT CACAAACGCC GACAGCCAGG TTCTCGCGCT CAAAAACGGC
GAGATCGATG TGGTCTCCGG CCTCACTCCC GCCGTTGCCC AGAGCCTGTC CGGCAATGCT
AACATCTCCA TCTACTCGAT CAACGACACC GGAGCCTGTG AAGTTGCATT CAACATGGCC
CAGTACCCGG CAAACATCTC CGCGTTCCGG CACGCGATGA GCCACGCGAT CGACCGGGAT
ACCATCAGTT CCCTCTTTGG CACCGGCCGG CCCACGGAGA CAACCTTCCT GATCCCGGAT
CTCGCCGGGG ATTACGTTAA CCCGGCCGAT GTCGGGATGT ACAACTATAA CCTGACCGAG
GCGCAGGAAC TCCTCGCACA GGCCGGTTTT GTCAGGAACG CAAACGGGGT CCTCATTGGA
CCCGATGGTA ACCCCGTCAC CATCACCATC CCCCTGGGCA CCAAAGGCGC CGATGTGAAC
GATAAGATCA TTGCGGTCCT CAAGAACGAC TGGGCACAAC TCGGGATCAG CGTGAGCACC
CTCAATTACC AGGACGCCAC CCAGTACCGC AACGCGGTCA ATGCCAACCC GGTCTTTATT
GACTCCTTCC CGGTCCTCCT CCACGATGAC CCGGATGCAC TGGGCAATTT TGCGGTCACT
CCCCTGCAGG AGACCAACTA CTACAACTAC AATGACCCTG AGTACAACCG CCTCGTTGCC
CGGGTAAAGA ATACCACGGA CCCGGTTGAG GTAAAGGAGA TGACATACCA GCTTCAGGAT
CTTCTGGCCC AGGATATCCC CACGGTACCC GTTGCTACCA CGGATACCCT GGTGGCATAC
CGGTCGGACC GGTTTGTCGG CTGGGACATC GGGCCCGGAT ACCACAGCAC CATGGACCCA
AGAGTCCTCG AAAACCTCAC ACCGGTACAG CAGACATAA
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| Protein sequence | MKSTVLSETK TYRAGIIYAL CMSGILVFCL VAGCTNSVST SPDTGNLTGV PANDVIIPVD
SPSSLMYTSN MQKGGVPGSS LIYEGLVIKD RNGIFDPALA QRWSVSPDAK TWTFDLVQNA
TWSDGVPFTC NEVKFTNDYM KANNLTMGYV LSDVQSVECP DNYTAVFNLK TPYSAFLDQI
SRTPGITISP AHIWQNISDP QHYKDNQMIG TGPFVFAQAA PGYYQFSTNE NYHGRVPTIP
GVVLKVITNA DSQVLALKNG EIDVVSGLTP AVAQSLSGNA NISIYSINDT GACEVAFNMA
QYPANISAFR HAMSHAIDRD TISSLFGTGR PTETTFLIPD LAGDYVNPAD VGMYNYNLTE
AQELLAQAGF VRNANGVLIG PDGNPVTITI PLGTKGADVN DKIIAVLKND WAQLGISVST
LNYQDATQYR NAVNANPVFI DSFPVLLHDD PDALGNFAVT PLQETNYYNY NDPEYNRLVA
RVKNTTDPVE VKEMTYQLQD LLAQDIPTVP VATTDTLVAY RSDRFVGWDI GPGYHSTMDP
RVLENLTPVQ QT
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