| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2360 |
|---|
| Symbol | |
|---|
| ID | 5411636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2424873 |
|---|
| End bp | 2425832 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640869616 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_001405517 |
|---|
| Protein GI | 154151899 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG0500] SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.328542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAAT CCATAAAGCC GGAACGTCTT TTCACCTCCC CACTATCGGG ATCTTCACCC
TTTCCCCGTG ATCCATTCTT CTGGAGGGAG CAGTGGCGGC AGCTGAAACT GGCTCATTGC
GCTGTCCCGG TATATGGGAA TGCCCGGCAG TTCTGGGCAA ACAAGGAGAT GATCAATGCC
GTTTATATGA AAGGCAGAAA AAAGCATGAC AGGGATGATG AGACCCGTGC AGCCGCCCTT
AGTGTTCCAA AAGGAGCCCG TGTTCTTGAT ATCGGGACCG GGCCGGGAAC CTACGCAGTG
CCGCTTGCGG CCCGGGGGTG CCGAGTCACG GCGGTTGAAC CGTCACCGGT TATGCGGGAA
GCTCTTGCCG AAAACATGCG CGAGCGGAAT GCCGAAGATA TCAGAGTAAT CCCCAAGCGC
TGGGAAGATA TCACGGTACA GGAACTCGGG GAACCGTTCG ATGTCGTCAT TGCCTCATAT
TCACTGACCA TGATGGATAT CGGTAAAGCC CTGGCAAAGA TGGTGGAGTG CTGTGCCGGG
ACCATCCATC TTTTCTGGTT CATGACCCCT CCTGCATGGG TTCAGGTAAA CAGGGATCTC
TGGCCGCTTC TTCATGGCGG GGAATTTCCC GGTGAGCCTA CAGCAGACTG GCTCTGGCAG
GTGCTTTGCG AGATGGGTAT CTATGCCAAC CTCGAAGTTG AGACGAAATT TCCTCCGTCA
GTCTACGCGT CCGTTGACGA TGCAGTTGCT GAGTTTTCCG GGAGACTGAA ATGCTCAACA
ACCGCCCACG AGGAGACTGT CCGGAATTAT TTCCAGTCCG TATTGCGTGA GGAAGGAGAC
GGTTTTGTAC TGGGGGGCGA GACTCTGGGG GCCCACATCT GGTGGACGCA GGGACAATCT
GCGGTGAAAT CAACAAATAT CCGGGGTTCG GGATCCCGTA AATCCCGGAA TACCCCGTGA
|
|---|
| Protein sequence | MPKSIKPERL FTSPLSGSSP FPRDPFFWRE QWRQLKLAHC AVPVYGNARQ FWANKEMINA
VYMKGRKKHD RDDETRAAAL SVPKGARVLD IGTGPGTYAV PLAARGCRVT AVEPSPVMRE
ALAENMRERN AEDIRVIPKR WEDITVQELG EPFDVVIASY SLTMMDIGKA LAKMVECCAG
TIHLFWFMTP PAWVQVNRDL WPLLHGGEFP GEPTADWLWQ VLCEMGIYAN LEVETKFPPS
VYASVDDAVA EFSGRLKCST TAHEETVRNY FQSVLREEGD GFVLGGETLG AHIWWTQGQS
AVKSTNIRGS GSRKSRNTP
|
|---|
| |