Gene Mboo_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_2232 
Symbol 
ID5410360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp2302364 
End bp2303017 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID640869484 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_001405389 
Protein GI154151771 
COG category[R] General function prediction only 
COG ID[COG1100] GTPase SAR1 and related small G proteins 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT TTTCCAGGAC ATTGGGGAAC GCAAAGAAGA GATTTTCCGT ATTTCTCAAG 
CGGTTTTTCA AGAAGAAGCG GACCCGGATC GGGATCTACG GCCCGCCGAA TGCCGGGAAG
ACTACGCTCG CAAACCGGAT TGCCCGGGAC TGGACGGGTG ACGCAGTCGG ACCGGTGAGC
GAGATTCCAC ACGAAACCCG GCGGGCACGC AGGCGTGAGG ATATTGTGAT CTCAGGGGCA
AACGGTCACA CCGTGACGAT TGATATTGTC GACACCCCCG GGGTCACAAC CAAGATCGAT
TACCACGAGT TCCTCGAGTT TGGAATGGAA AAGGATGAGG CGATCATCCG CGCCCGTGAG
GCCACCGAAG GTGTCGCCGA GGCCATGCAC TGGCTGCGCG AGGATATCGA TGGCGTGATC
TACATGCTGG ATTCAACCCT TGATCCCTTC ATGCAGGTCA ATATCATGAT GATCGGGATC
ATCGAGAGTC GTAAGCTGCC GGTAATAATC GTGGCAAACA AGATCGACCT GCCCGACGCG
GCTCCGGCCC GGATCCGCAG CGCCTTCCCC CAGCACCCGG TGGTTGCCAT CTCGGGGCTT
GAGGGCAGGA ACACCGAAGA GCTGTACGAG AAGATGATCC AGAACTTCGC TTAA
 
Protein sequence
MTTFSRTLGN AKKRFSVFLK RFFKKKRTRI GIYGPPNAGK TTLANRIARD WTGDAVGPVS 
EIPHETRRAR RREDIVISGA NGHTVTIDIV DTPGVTTKID YHEFLEFGME KDEAIIRARE
ATEGVAEAMH WLREDIDGVI YMLDSTLDPF MQVNIMMIGI IESRKLPVII VANKIDLPDA
APARIRSAFP QHPVVAISGL EGRNTEELYE KMIQNFA