Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_2222 |
Symbol | |
ID | 5410157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 2294212 |
End bp | 2295042 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640869473 |
Product | DNA-directed RNA polymerase subunit D |
Protein accession | YP_001405379 |
Protein GI | 154151761 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCG AATTCGCGAG TCTGGACGAC ACCGTTGCAC GCTTCACGCT CTCAGGAGCG CAGCCCGGCT TTGCAAACTC GTTTCGGCGG GCAATGATCG GCGAAGTGCC GACCCTTGCC ATAGAGGACG TGCGCATCTA CGATAACACG AGCGCACTCT TCGACGAAAT GTTGGCGCAT CGCCTCGGGC TCATTCCTAT AAGGACCGAT CTTACCAGTT ATTCGACTCA AGGAGACTGT TCGTGCGGAG GGGCGGGCTG CCCATCCTGC ACGGTCACCT ATACGCTCAG CGTTGAGGGC CCCAAGCTGG TCACCTCAAG CGACCTTATC CCGCAGGATC CTCAGGCTGC GCCGGTCAGT GACAACATCC CCATCGTAAA ACTCATCAAG GGACAGAAAC TGGTCATCGA AGCGCGTGCC GTCCTCAACA AGGGCAAAGT GCACGCAAAG TGGCAGCCGA CCCTCGTGTG CGGGTACAAG AACTACCCGG TCATCACGAT CAGCCCCACC TGCGATGCAT GCGGGATGTG CGTGGACGAA TGCCCCCGCA CTATCCTTGC ACTTAAGGGA AAGAAAGTCG AGGTCATCGA GGGCAGGCTT CCCGACTGCT CCATGTGCAA GCTCTGCGAA CGGGCCTGCC TGGCAAGCGG TATCGGGGAG GAACCGGCAA TCCGGATTTC CGCAGAACCC GACCGGTATA TTTTCTCGGT CGAAAGTGAC GGATCGCTGC CCGTAAAAGA GATTATGGTC CAGGCGCTTG GCTTTGTCAA AGCGCAGGCA GAAGAGCTGG AGAAACAGAC AAGCGAAATT TCAGGGGAGG AGAAGAAATG A
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Protein sequence | MEIEFASLDD TVARFTLSGA QPGFANSFRR AMIGEVPTLA IEDVRIYDNT SALFDEMLAH RLGLIPIRTD LTSYSTQGDC SCGGAGCPSC TVTYTLSVEG PKLVTSSDLI PQDPQAAPVS DNIPIVKLIK GQKLVIEARA VLNKGKVHAK WQPTLVCGYK NYPVITISPT CDACGMCVDE CPRTILALKG KKVEVIEGRL PDCSMCKLCE RACLASGIGE EPAIRISAEP DRYIFSVESD GSLPVKEIMV QALGFVKAQA EELEKQTSEI SGEEKK
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