| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2184 |
|---|
| Symbol | |
|---|
| ID | 5412217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 2259329 |
|---|
| End bp | 2260096 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640869434 |
|---|
| Product | chromosome segregation and condensation protein ScpA |
|---|
| Protein accession | YP_001405341 |
|---|
| Protein GI | 154151723 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1354] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGTTG ATACTCCTGC TCCCGGTGAT GTCCCGGTAG CAACGGAGCC CCCTAATCTC
GAAGACCCGG TCGAGATCCT TGTCGGGCTT GCCGAACGGG GCGAGATCGA CCCATGGAAC
ATCGATATCA TCGAGGTTAC CGATCGGTTC CTCTCTGAAC TGGAGAAATG CCGGCAGCTT
AATCTCCAGA TCTCGGGACG CACCCTCTTT TACGCCGCAA CGCTCCTGCG GATGAAATCC
GAACAACTGG ACATTGCCCC GGACGAGGAA GATGGCACAG GAGACGAGGG CGAGGATTTC
GAGGCTGGCG AAAGCGATGA TTTCGAGGAT GAAGGCCGGT TTGGTCCCAT CGAGCGTTTG
GAACGGGAGA TCCAGCGTCG GCTCGATCGA AAGAGCCTGC GGAAAAGCCC TGTCACCCTC
TTTGAGCTGA TCATCGAGCT CAAGAACCTG GAAAAAGAGG AGCGGAGGCG CCGTCGCATG
CCCCCGGCAG ATGACGACTA CCTTATCGAG GCCGATGACG TGGTGAGTAT CGCCCATGAA
GAAGGCTACC AGGACTCGGC CCGTCAGGTG ATTGAGGAGT GCCTGGCAAA CGCCGACCCG
GCAACCGAGA TCACGCTTGC CGAGCTCTGC AGGGACCTCG GGTGGGGAAT TCCCGAGGTG
TACCTCCCTC TGCTTTTTTT AGCCCTTGAC GGGCAGTGCG CCCTGCGGCA GGAGGAGTTC
TTCGGGGATA TCTATATCCA CGTGGTAAAG GCGGATGAGG AGTCCTGA
|
|---|
| Protein sequence | MPVDTPAPGD VPVATEPPNL EDPVEILVGL AERGEIDPWN IDIIEVTDRF LSELEKCRQL
NLQISGRTLF YAATLLRMKS EQLDIAPDEE DGTGDEGEDF EAGESDDFED EGRFGPIERL
EREIQRRLDR KSLRKSPVTL FELIIELKNL EKEERRRRRM PPADDDYLIE ADDVVSIAHE
EGYQDSARQV IEECLANADP ATEITLAELC RDLGWGIPEV YLPLLFLALD GQCALRQEEF
FGDIYIHVVK ADEES
|
|---|
| |