| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2114 |
|---|
| Symbol | |
|---|
| ID | 5411212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 2188446 |
|---|
| End bp | 2189153 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640869359 |
|---|
| Product | cobalamin synthesis protein, P47K |
|---|
| Protein accession | YP_001405271 |
|---|
| Protein GI | 154151653 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG TAATCGTTGC CGGCCCCCCA AGCGCCGGAA AGACCGCGGT CATCCGCCAG
ATCATAAAAA AATTCGTAAA GTCCGACAAA CCTGCGTATC TCAAGATCGA TGTGGTAAAG
GCATTCGAGG ACGAGGAACT CGCTGAAGAA TTCAAAATCC CGACCCGCAA GGTCTACTCG
GGCGATCTCT GCCCTGATCA TATGGGCATC ATGGTACTCA GGGACGCAAT CGCCTGGGCA
GAAGGGATCG GTGCCGGTAT CCTTATTGTC GAGAGTGCAG GGCTCTGCCT CCGCTGCACT
CCGTACACTA CGCAGGCATT CGGCATAGCT GTACTTCCCG CCGTATCTGG TAGCAACTCA
CCCCTGAAAA TGGCACCCTT AATCGCCCTT GCCGATGCAG CCGTAGTCAC CAAGACCGAT
CTGGTTTCGC AGGCGGAAAA AGAGGTATTC CGGGAATGCA TCCGCAGCGT TGTCCCAAAG
ATCGATATCA TCGAAACCAA TGCCGTGCAG GGGACGGGCC TCCGGTACCT CCTCAAGGCC
ATCAGCAAGT ACCCTACAAT CACGGATGCA GAAGCCATAG CGCTCCGGGG TACCCCGCCG
CTTGGGGTCT GCACGATCTG CATAGGTAAG AAAGAGATCG GGTGGCAGCA CCACTTTGGT
GTGATCCGCC CGCTTGAAGA GGCAGATAAC CTCTACCGGG GGGACTAA
|
|---|
| Protein sequence | MKLVIVAGPP SAGKTAVIRQ IIKKFVKSDK PAYLKIDVVK AFEDEELAEE FKIPTRKVYS
GDLCPDHMGI MVLRDAIAWA EGIGAGILIV ESAGLCLRCT PYTTQAFGIA VLPAVSGSNS
PLKMAPLIAL ADAAVVTKTD LVSQAEKEVF RECIRSVVPK IDIIETNAVQ GTGLRYLLKA
ISKYPTITDA EAIALRGTPP LGVCTICIGK KEIGWQHHFG VIRPLEEADN LYRGD
|
|---|
| |