| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_2106 |
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| Symbol | |
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| ID | 5410640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 2178388 |
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| End bp | 2179389 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640869351 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_001405263 |
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| Protein GI | 154151645 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGTAG CACTACGGGA TATCCTTGCC GATTACAAGA CCCCGGTCAC CTGGGAGGGA
CTCTCCGGGG TGGCGGCGGT TGATGCAAAC AACACGCTTT ACCAATTCTT AACCATCATC
CGACAGCCGG ACGGAACGCC GCTGATGGAC GCCAAAGGCC GGGTCACCTC CCATCTCTCG
GGGATACTTT TTCGGATGGT CAACTTCCTT GAAAAAGGGA TAAAGCCGGT CTTTGTCTTT
GACGGGAAAC CGCCCGAGCT CAAGCAGGAA ACGAACGCGG AGAGAAAGAA ACTCCGTGAC
GAGGCGGGGG AGAAGTACAA AGAGGCAGTT GAGCGGGGCG ATGAGGAGGA GGCATACAGG
CAGGCCCGGT CAGCGACCCG GGTGGATGAA ACCATTATTG CAACCTCAAA GGAGCTCCTC
GATCTCCTGG GAATTCCGTA CGTGCAGGCT CCTTCAGAAG GCGAGGCGCA GGCGGCATTC
ATGGTGCAGC GGGGCGATGC ACGCTTTGCA GTCTCGCAGG ACTACGATAC CCTGCTCTTT
GGCGCACCGC TCCTGATGCG CAACCTTACC GTGAGCGGGA AGCGCAAGAT CCGGGGCCGA
GCCGTAACTG TCAATCCCGA ACGCCTCGTG CTTTCCGAAG TGCTCTCCGG CCTCTCCCTG
ACCCGGGAGC AGCTTGTGGA AGTCGGCATC CTGGTCGGAA CCGATTTTAA CCCGGGTGCG
GCCGGTGTGG GGGCAAAGAC CGCACTCAAG ATTGTAAAGA GCGGGGGGTT TGCCCAAAAA
CTCGCCGAGA AGTGCCCGGG CTTTGACCCG GCGCCAGTGG CCGACTTTTT CCTGAAGCCG
CCGGTGACAA CGGAGTACGA GCTTGCGTGG GGCCACCCGT GCGTGGAGGG GATCAAAAAG
ATGCTTTGCG ACGGGTACGA CTTTGCCCCG GAACGGGTTG ATGCGGCACT CGAACGCTAC
TCGGCAAAGG CAGGTCAAAA GACGCTGGAA AGCTTTTTCT AA
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| Protein sequence | MGVALRDILA DYKTPVTWEG LSGVAAVDAN NTLYQFLTII RQPDGTPLMD AKGRVTSHLS
GILFRMVNFL EKGIKPVFVF DGKPPELKQE TNAERKKLRD EAGEKYKEAV ERGDEEEAYR
QARSATRVDE TIIATSKELL DLLGIPYVQA PSEGEAQAAF MVQRGDARFA VSQDYDTLLF
GAPLLMRNLT VSGKRKIRGR AVTVNPERLV LSEVLSGLSL TREQLVEVGI LVGTDFNPGA
AGVGAKTALK IVKSGGFAQK LAEKCPGFDP APVADFFLKP PVTTEYELAW GHPCVEGIKK
MLCDGYDFAP ERVDAALERY SAKAGQKTLE SFF
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