| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1880 |
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| Symbol | |
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| ID | 5411374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1949718 |
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| End bp | 1951223 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869118 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001405038 |
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| Protein GI | 154151420 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.096597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGGCA ACATCCCTTT CATGAACAGT CAGGGCTCTG CCCCCCGGTC CGGTTTTTTC
CTCCTTGTCT TCTCCATCTC GCTTGCCACA TTCATGGCGG GCCTTGACGG CACGATTGTC
AATATCGCGC TTCCGACAAT CTCGGAGGCG TTCCACGTCT CCTCCACAAC GGTGAGCTGG
GTTGCCACCG CTTACCTGCT CGTGATGGCC GGCTGCGTGC TGATCTTCGG GAAAATATCG
GACATCATCG GTTTTAAGAA GATATTCCTG ACCGGTTTTG TCATCTTCAC GCTCGGATCA
CTTGCCTGTG GCACCCTGCC GGACCTGTTC CATTCCCTTC CGGTGCTTGT GGGCTCGCGC
ATGGTCCAGG CAATTGGCGG GGCAATGATC ACTGCCATTG CGCCGGCCAT GGTCACGGCG
TACATCCCCT TGGACCAGCG GGGAAAGGCA ATGGGCATTG TCATGACGCT TGCCGGCCTT
GGGACTGCGC TCGGGCCGAC CATTGGGGGA TTCCTGACCC AGTACCTCTC GTGGCACTGG
ATCTTTTTCA TCAACGTGCC AGTTGGGATC GGTGCGGTTA TACTCGGCAC CCGGGAGATC
CCGGCATCGA CAGCCAGGGG CAGTCTTGCC GGTTTTGACC GGTCCGGCGC CGTTCTCATA
TTTACCGGCC TTGCCGCCCT GCTCTTTGTA GTCTCCGAAG GAGAGACGAT GGGCTGGACC
TCCCCTGCCA TCCTGGGTAT TGCCGCCCTT GCCATAGTCA CGCTCGCGTG GTTTATCCGG
CACGAATGCC GGCTCTCTGA TCCGCTTCTT GACTTCTCGC TCTTCAAAAA CAAAAATTTC
CTGGCCGTAA ACCTCCTGCT CTCCCTGGTA TTTCTGAGCT TTTCCGGGAT CAACTACCTC
CTGCCGTTCT ACCTCAAGTA CATCGGGGCC TACGATACCT CCACTGCAGG CCTGATCATG
ACCGCGCTTT CCTTTGCCAT GATGGTGGCA GGTATCCTTG CCGGCATGCT CTTCAACCGG
ACCGGCCCCA AGCTGCTCTG CATTGCTGCC GGTATCCTGC TTACCGCAGG CTATTTCCTC
ATCATGCAGC TCCACCCGGA TACACCGGTC GGATATATCG TCCTCTGTCT TGCCCTCATC
GGGTTTGGCC TGGGCCTGAT TATCACCCCG GCTTCGAACC TGGTGATGAA CTCGGTGGCA
AAGGCAAAAC AGGGCATGGT CTCAAGCCTC ACGAGCCTCG AACGCTTTGT CCCCCTCACG
CTGGGTATTG CAATGTTCAA CCTGATCTTC CTGTGGGGGA TCCTCTCCAT TGCCACAAAC
CACAATGTGA CACAGGCCTC CCCGGTCGAC CTGCAGATAA AAGTAGCCTC AGCCGGTTTT
GATCTTGCGT TCCTGGGCTC GTTTATCCTG GGCCTGATCA TCCTTGCCCT GACGCTCGTG
ATCCGTCAGG AGATCCACCC GGATTACGAG AACGACACAG GAGAAAACGG ACCGGGGATG
ATCTAA
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| Protein sequence | MGGNIPFMNS QGSAPRSGFF LLVFSISLAT FMAGLDGTIV NIALPTISEA FHVSSTTVSW
VATAYLLVMA GCVLIFGKIS DIIGFKKIFL TGFVIFTLGS LACGTLPDLF HSLPVLVGSR
MVQAIGGAMI TAIAPAMVTA YIPLDQRGKA MGIVMTLAGL GTALGPTIGG FLTQYLSWHW
IFFINVPVGI GAVILGTREI PASTARGSLA GFDRSGAVLI FTGLAALLFV VSEGETMGWT
SPAILGIAAL AIVTLAWFIR HECRLSDPLL DFSLFKNKNF LAVNLLLSLV FLSFSGINYL
LPFYLKYIGA YDTSTAGLIM TALSFAMMVA GILAGMLFNR TGPKLLCIAA GILLTAGYFL
IMQLHPDTPV GYIVLCLALI GFGLGLIITP ASNLVMNSVA KAKQGMVSSL TSLERFVPLT
LGIAMFNLIF LWGILSIATN HNVTQASPVD LQIKVASAGF DLAFLGSFIL GLIILALTLV
IRQEIHPDYE NDTGENGPGM I
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