| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1875 |
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| Symbol | |
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| ID | 5411369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1944805 |
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| End bp | 1946037 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640869113 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_001405033 |
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| Protein GI | 154151415 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.451717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATAA ACGAACAGGT TGAAAAGATC CTTGCCTATG GCGAGTGTTG CGACCATTGC
CTGGGCCGTT TCTTTGGGAA ACGCTCGCAT GGCCTTACCA ATGATGAACG TGGACGGGGG
CTCCGGATCG CACGGGCCCT TGCTGCAAAC CAGCCATACG AGCGTTTTAG CGGCACCTGC
TGGGTCTGCG GCAACTTCTT TGATAATATT CCCCAATGGG CACAGAAAGT CGCAGCAGCC
CTGGAAGGCC ACGAGTACAA GACGTTCCTT GTCGGCTGCC GGGTCCCCCC GCTTATCGCG
GAGAACGAGG AGATGGTCTG GAGCGATCTC TCGCTTGGCG AACCGGAACC GTTTAAGTCC
GAGGTGAACC GGGAGGTAGG CAAGGCGGTA TCAGTCATCA CGGGAAAGGT CGTGGACTTC
AAAAAACCCG ATATCACCGT CCTGCTCGAC CCGGCGTCAG GTCTCGTGGA TATCCAGGTC
AATGCCCTGT TCTTTTATGG CAGGTACCAG AAGTTCGAGC GCGGCATCCC GCAGACTCAC
TGGAACTGCC GGGCCTGCGG GGGTGCCGGC TGCGAGAAGT GCAATTATAC CGGCAAGCAG
TACGCAGACT CGGTGGAAGA ACTGATCGGC AGGCCGGTCA TCGAACTCTT TGATGCGGAG
AACGCGGTCC TGCACGGGGC GGGCAGGGAA GATATCGACG CCCGTTGCGT GGGTACCGGC
AGGCCATTTA TCCTTGAGAT CGTGGCACCC AGGAAACGTT CTGTTGATCT GGCCGCCGTG
GAAGCGGAGA TCAACAGGTC TGCAGAAGGA AGGGTTTCGG TTGCCCTTTC GCGCTGGAGC
GACCGCTCGG AGGTGGAAAC CCTTAAATCA AGCAAAGCGC ATAAAAAATA CAGGATCCTG
GTCGAGGTTG ATGGGCAGGT GCCGGCAGAA CTGCTTGCAA ATGCCCTGAA TACCTTAAAG
GGCGTCACAA TACAGCAGCG CACGCCCGAA CGGGTCGCCC ACCGGAGAGC AGATAAGATC
CGGGAGCGTA AAGTCCTCGA TATCGAGTAT GTGGGGGAAC AGGACGGAAA GTTCATTCTT
GAAGTCCTCG GCGAAGCCGG CCTCTACATC AAAGAACTCA TATCAGGCGA TCAGGGAAGG
ACCATCCCGA GTCTTGCCGA GATCCTGCAA CGACCGGCAC GCGTCACCAG TCTTGATGTC
GTGCAGGTAG AAGGACCACA GGAGGGAGAT TAA
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| Protein sequence | MEINEQVEKI LAYGECCDHC LGRFFGKRSH GLTNDERGRG LRIARALAAN QPYERFSGTC
WVCGNFFDNI PQWAQKVAAA LEGHEYKTFL VGCRVPPLIA ENEEMVWSDL SLGEPEPFKS
EVNREVGKAV SVITGKVVDF KKPDITVLLD PASGLVDIQV NALFFYGRYQ KFERGIPQTH
WNCRACGGAG CEKCNYTGKQ YADSVEELIG RPVIELFDAE NAVLHGAGRE DIDARCVGTG
RPFILEIVAP RKRSVDLAAV EAEINRSAEG RVSVALSRWS DRSEVETLKS SKAHKKYRIL
VEVDGQVPAE LLANALNTLK GVTIQQRTPE RVAHRRADKI RERKVLDIEY VGEQDGKFIL
EVLGEAGLYI KELISGDQGR TIPSLAEILQ RPARVTSLDV VQVEGPQEGD
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