| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1858 |
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| Symbol | |
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| ID | 5410451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1934292 |
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| End bp | 1935695 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640869096 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001405016 |
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| Protein GI | 154151398 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0434953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.402686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTG ATTCCCCGAC AGGGAAGGCC CCGGAACCGG TCCCTGTACA GGCAACACTT
GGCGTTGCCC TCCTGACCGG CGATCCCAAA AAGGCGATCC TGAAACTCTC GGGCCCGATG
ATCGTTGTCA TCCTCCTGAT GTCGACCTAC AACCTGATCA ACGCAATCTG GGTGGCCGGT
CTTGGCCCGG ATGCCCTTGC CGCGGTCGGG TTTGTCTCTC CCCTGTTCAT GGTGCTCGTT
GGCTTCGGAA ACGGCCTTGG CGCCGGGGCA GCCTCGCTTA TTGCCCGGAG GATCGGGGCA
GGTGACCGTG CAGGGGCAGA CAGTGCGGCT GTCCACTCCC TGGTTATCAT CACCGTGATC
TCGGTTGTCA CGACCGCGCT CCTGCTTGCC TTTGCCGGAC CCATCCTGAT CGCGTTTGGC
GCCGGTCCAA CCCTGGGGCT CGCCCTTGAG TACGGGCAGA TCATCTTTGC CGGGACCCTC
CTCCTTCTTG TCACAAGTAT CCTTGGTGCC ATCCTCCGGG CCGAAGGTGA CATGAAACGG
ACCTTCTATG TCTTTGGCGC ATCGTCCATC CTCAACATGA TCCTCGATCC GATCCTCATC
TACCGGGCGC ACATGGGCAT TGCCGGTGCC GCATGGGGGA TGATCATCTC CCAGGTCATG
GTCGCCCTCG TGCTCCTGTA CTTGTTCTTT GTCAAAAAAG ACACCTATGT CTCGCTCTCA
TGGAATGGTT TTGTCCCGGA CAAAAAGACG GCCATGGGTA TCCTTGGCGT GGGCCTGCCC
GCCAGCACGG AATTTTTCAT GATGGCGATC CTCTCGATCT TTGTCAACCT CATGCTCGTG
ATGGTTGCCG GCACCGACGC CGTAGCGGTA TACACCGCGG GTTGGAGGCT GGTCATGTTT
GCGGTCATTC CTATCGTAGG GATCGCCCTT GCGGTCGTTT CCGTAGCCGG GGCTGCATAC
GGGGGACGGC ACTTTGATAA GCTCCCTATC ATCCACCACT TCTCGATCCT GCTCGGACTT
GCCATTGCGC TCTGCACCAG CGCGATCACC TGGCTCTTTT CCTCCCAGAT CGCGACTGTT
TTTACGTACT CATCAGAGAC CGCGTATCTC ACCCCGGAGA TTGCGGCATT CCTTTCGGTT
ATGTGCCTCT TTTACCCGTT TGTCCCGCCG GGCATGATGT CGACTTCGAT CTTTCAGGGT
GTGGGTAAGG GCATGACCTC GCTTGCGATC GTGGTGCTGC GGGAGCTGGT CTTTATTGCC
GTTTTTGCCT GGATGTTCGG GATTGTCCTT GGCATGGGAG AACGGGGGGT CTGGTGGGGC
ATGGTGGTGG GTGTCACGCT TGGCAGCCTG GTTGCCTATG CCTGGGCCCG GGTATATATC
CGCAGGCTCC GCCGGAACGC ATGA
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| Protein sequence | MSADSPTGKA PEPVPVQATL GVALLTGDPK KAILKLSGPM IVVILLMSTY NLINAIWVAG
LGPDALAAVG FVSPLFMVLV GFGNGLGAGA ASLIARRIGA GDRAGADSAA VHSLVIITVI
SVVTTALLLA FAGPILIAFG AGPTLGLALE YGQIIFAGTL LLLVTSILGA ILRAEGDMKR
TFYVFGASSI LNMILDPILI YRAHMGIAGA AWGMIISQVM VALVLLYLFF VKKDTYVSLS
WNGFVPDKKT AMGILGVGLP ASTEFFMMAI LSIFVNLMLV MVAGTDAVAV YTAGWRLVMF
AVIPIVGIAL AVVSVAGAAY GGRHFDKLPI IHHFSILLGL AIALCTSAIT WLFSSQIATV
FTYSSETAYL TPEIAAFLSV MCLFYPFVPP GMMSTSIFQG VGKGMTSLAI VVLRELVFIA
VFAWMFGIVL GMGERGVWWG MVVGVTLGSL VAYAWARVYI RRLRRNA
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