| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1854 |
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| Symbol | |
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| ID | 5410447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1931466 |
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| End bp | 1932725 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640869092 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001405012 |
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| Protein GI | 154151394 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.417147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.513594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAC GCCTGCCCCT GCGGTTCTTC GGGATGTTTG CCCTGCTCTG CCTTCTTGTA
CCTGCGGCAC TGGCAGTTTC ACCCCTCTGG ATCGTCAATG CCACCCCGGG CGAGAGCCTG
TCTGCGGTGG CCATGGCACA TGACGGTTCG GTCATCGTTG CCGGGGGAGA CCAGCTGATT
GCCATCTCCC CGACGGGTGA AAAACTCTGG GCCGGGTGGA GTGGCTCGCC CCTTGCGGTG
AGCGCCGATG GCGGGTATAT TGCGGCGGCC CAGGGCCAGC TTGTACAACT TATCTCGGGG
CAGGGAATCC TTCTCTGGCA GCAGCCGCTG GGCGAAACGG TCACGGCCCT CTCCCTCTCA
CCGGATGCGG AGGTGATAGC AGCCGGCGGC GGGACATCGA TCCAGTCCTG GTACAATTCG
GGTGCCGGCA TGGGAAAGAA CACCACCGGA ACCGTGCAGG ATCTCGCAGT ATCCCCGGAA
AAGGATCAGA TCCTGGTCTG CACCGCCGGG GCCCTGCAGA GTTTCAACCT CTCGTATGTC
CCCTTCTGGA ATGACACAAC CTTCAACCCT TCGGCTGTGG CAATCTCCGG TGACGGCACC
GGAATCGTAG CCGTGAACGG CAACCGGGTA CGGATGTACC ACGGTGGCGG GGTTCTGCTC
TGGAACCAGG CATTCCCCGG GGGAAACATC ATCTCCCTTG CCTATTCCAA TGACGGATCA
ACCATTGTTG CCGGGCGGGA CGACGGAACA GTTCTTGATA TCGGGCGCAA CGGGAACCTC
ATCTGGACCG GGACGGCCGG TGCCTGGGCA ACGAGCGTGG CCGTTTCGGA TAACGGCTCA
ACGGTTGCCA CCGGCAGCAT CGATAACCGG ATCCATGTCT ACGACGGACA GGGCACGCTC
CTTGGGGAAG CTATTACCAA AAATCCGGTA AAATCCCGGT CGGTTGCCGT GAGCGGCGAC
GGCAGCCTGA TCGTAGCGGT TGACAACACG AACGTGTACG GATTTTCGCG CAGCCAGTTT
GCCACACCGG CCAACCTGTC CGCGGCATCC ACGCCGGCCA TGGGAGGGAC CACGAACACT
ACGCTCCCGT CCTCACCGGT AAGCACAACT CTTATGAGCA CCCTCTCCGC GACTGCACCG
GGGACCGCTC AGGGTGCGAG CCCGGCCCCT GCGGGAACCA CCATGCCCGG GTTCTCCCCT
CCCCTTGTCC TGTGTGCCTT TGCGGCCCTG GCCTTTGCAA AGGGACGCCT GCACCGGTAA
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| Protein sequence | MPTRLPLRFF GMFALLCLLV PAALAVSPLW IVNATPGESL SAVAMAHDGS VIVAGGDQLI
AISPTGEKLW AGWSGSPLAV SADGGYIAAA QGQLVQLISG QGILLWQQPL GETVTALSLS
PDAEVIAAGG GTSIQSWYNS GAGMGKNTTG TVQDLAVSPE KDQILVCTAG ALQSFNLSYV
PFWNDTTFNP SAVAISGDGT GIVAVNGNRV RMYHGGGVLL WNQAFPGGNI ISLAYSNDGS
TIVAGRDDGT VLDIGRNGNL IWTGTAGAWA TSVAVSDNGS TVATGSIDNR IHVYDGQGTL
LGEAITKNPV KSRSVAVSGD GSLIVAVDNT NVYGFSRSQF ATPANLSAAS TPAMGGTTNT
TLPSSPVSTT LMSTLSATAP GTAQGASPAP AGTTMPGFSP PLVLCAFAAL AFAKGRLHR
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