Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1658 |
Symbol | |
ID | 5410567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1735432 |
End bp | 1736328 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868892 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001404818 |
Protein GI | 154151200 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.468132 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0440332 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATG TAGTAGGCCA CACCGCGGTC GATCATATCT CAAAGGTACA TCACCTCCCG GAGCCCAACA AGTCCACCCA TATCACAGAC CGTCAGGTTT TTTTCGGTGG CGGTGCAGCC AATATTGCGG CAGGGATCGC TACCCTTGGT GAACAGGTGA CGCTTCATTC CTGTGTCGGT GACGACTTTT CCGGCAGTGC TTATGAAAAA TGGATGGACG GGCTGGGTAT CCGCCGGCAG TTTTTCGAGG TCCCCGGCAC GCATACGCCG ACAGCCTTTA TGTTTACTGA CGATGCGGGC AGCCAGATGA CCTTCTTTGA ATGGGGGGCA TCAGCGGCAT TTGCGACCGC GGAGGCCCCG GCGCTCCCTT TAGTCCACAT GGCAACTGCT GATCCCGAGT TCAACTGCCG GGTGGCAGAA AAGAGCGAAT TTGTCTCGTT TGATCCGGGA CAGGATGTTT TCTGGTACAC AAAAGAACAA CTTGATTCAA TCCTGGCAAA CACCGATCTC CTTTTTGCCA ACCAGCACGA GGTAAAGCAG ATGTGTGCCA CGCTCGGGGT GACAAAAGAG GCACTCGTCG ATAGTGTCAC ACTGGCGGTC TTTACCATGA GCGGGGATGG AAGTCGCCTG TACGCTGACG GTAAAGAGCA TTTTGTCCCG GCAGTCCCGG TCACGCTCTG TGACCCGACG GGCGCAGGAG ATGCATACCG CTCCGGCTTC CTGTCCGCAT ATGTGAGGGG GCATTCCCCG CTGGACTGCT GCCGGGTTGG GACCGTGACC GCGTCCTACG TAGTCGAGCA CGCCGGCTGC CAGACCCATC TGCCCACCTG GACGCAGATG CTCGAACGCT ACCGGAAACA CTTCGGCACT CTTGAACCTG TGCCGGCACA GGGATAA
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Protein sequence | MIHVVGHTAV DHISKVHHLP EPNKSTHITD RQVFFGGGAA NIAAGIATLG EQVTLHSCVG DDFSGSAYEK WMDGLGIRRQ FFEVPGTHTP TAFMFTDDAG SQMTFFEWGA SAAFATAEAP ALPLVHMATA DPEFNCRVAE KSEFVSFDPG QDVFWYTKEQ LDSILANTDL LFANQHEVKQ MCATLGVTKE ALVDSVTLAV FTMSGDGSRL YADGKEHFVP AVPVTLCDPT GAGDAYRSGF LSAYVRGHSP LDCCRVGTVT ASYVVEHAGC QTHLPTWTQM LERYRKHFGT LEPVPAQG
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