Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1458 |
Symbol | |
ID | 5411403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1495866 |
End bp | 1497035 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640868693 |
Product | proteasome-activating nucleotidase |
Protein accession | YP_001404619 |
Protein GI | 154151001 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.264354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTA TGGAAGAGAC TGCGGTGGAC AATGCCCCGC CCTCAAACGA GCTCAAATAC CAGATCCAGA TAAACGAGCT TGAGGCGGCG CTTCTGGAAC AGAAGGTCAG AGCCGAAGAT CTCCAGAAAG AAAATGCGCA GCTGAAACGC GAGAACAACC AGCTCAAGCG CATGCCGCTC TTTGTAGCGG TGATCATCGA TATTCTGGAG AACAACGAGA TCTATCTCCG CCAGCAGGGA AACAACCAGG AGTACCTGAC CCATGCCTCG GATGAGCTCA GGCCCCTGTT AAAGCCCGGC ACCAAGGTGG CAGTCAACAA CGCACTCTCG ATTGTCAAGG TGATCGGGAA CGTTTACGAC TCCCGGGTAC GGGTGATGGA GCTCGAGGAG TCCCCATCGA TATCCTATAC GCAGATCGGG GGACTTACTG ACGAGATAAA AGAAGTACGG GAAGCAGTGG AGTACCCGCT CACCAAGCCC GAGATCTTCC GGCGGATAGG AGTGGAACCA CCCAAGGGGA TCCTGCTCTA CGGTTCACCC GGGACCGGAA AGACCCTGAT CGCAAAGGCG GTCGCCCACG AAGCAAAGGC AACATTCATC CGCATGTCGG GAAGCGAACT GGTCCACAAG TTTATCGGCG AAGGAGCCGG GCTTGTCCGT GAGCTCTTCA CCCTTGCCCG GGAGCGGGCA CCCGCGATTG TCTTTATCGA CGAAATCGAT GCTGTGGGTT CCATGCGCAC CAATGATGGC ACAAGCGGCA GCGCCGAGGT GCAGCGCACG CTCATGCAGC TCCTTGCCGA GATGGACGGA TTTGATAACC GGGGCGAGAT CCGGATCATG GCTGCCACCA ACCGTGTTGA CATGCTTGAC CCGGCACTCC TGCGGCCCGG CCGGTTCGAC CGGCTCATCG AGATCCCGCT TCCCGATCGT AATGCACGCC TTGAGATCCT GAAGATCCAC TCAAAAAAGA TGCACCTTAA CGATGTCAGG CTCGATATGA TCGCCTCTAT GACTGACGGG GCTACCGGAG CTGAACTCCA GGCAGTCTGC CGCGAAGCCG GCATGATGGC AGTCCGCCGT GATGCTTCCG CAATAGAGAT GAAGGATTTT ACTGATGCAG TCAGGAAAGT CAGGACCGAG ACTATCACCG ATACCCGGAT GTATACATAA
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Protein sequence | MSSMEETAVD NAPPSNELKY QIQINELEAA LLEQKVRAED LQKENAQLKR ENNQLKRMPL FVAVIIDILE NNEIYLRQQG NNQEYLTHAS DELRPLLKPG TKVAVNNALS IVKVIGNVYD SRVRVMELEE SPSISYTQIG GLTDEIKEVR EAVEYPLTKP EIFRRIGVEP PKGILLYGSP GTGKTLIAKA VAHEAKATFI RMSGSELVHK FIGEGAGLVR ELFTLARERA PAIVFIDEID AVGSMRTNDG TSGSAEVQRT LMQLLAEMDG FDNRGEIRIM AATNRVDMLD PALLRPGRFD RLIEIPLPDR NARLEILKIH SKKMHLNDVR LDMIASMTDG ATGAELQAVC REAGMMAVRR DASAIEMKDF TDAVRKVRTE TITDTRMYT
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