| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1332 |
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| Symbol | |
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| ID | 5411599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1357487 |
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| End bp | 1359259 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868564 |
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| Product | putative ATPase RIL |
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| Protein accession | YP_001404493 |
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| Protein GI | 154150875 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.178522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.252522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTG CCATTGTCCA CAAGGATCGC TGCCACGCCA AAAAGTGTGG AACCGAGTGC
ATCATCTATT GTCCCCGGGT CAGGACCGGT GACGAAACTG TTAGTATCGG TGAGGATGGC
AAGGCACTCA TCTCCGAAGA ACTCTGTGTT GGCTGCGGTA TCTGCATTAA GAAGTGCCCG
TTTGATGCCA TCGATATCGT GAGCCTTCCC GAGGAACTCG AACATCCCAC TCACCGGTAC
GGCAAAAACG GGTTTGCATT GTACGGCCTG CCCATACCGG TCCAGGGAAA AGTGACAGGC
ATCCTTGGCG CAAACGGTAT CGGGAAGAGT ACGGCAGTGA AGATCCTCTC AGGACAGCTC
CGCCCCAATC TTGGCAGTTT TGATTCCGAG GTGGCATGGG AGGAGATCCT CAAGCGCTAC
ACCGGAACAG AACTTTTCGA TTACCTCCAG ACGGTCTCCA AAAAGACTAA GAAGATTGCA
GTCAAGCCCC AGTACATCGA CTTTATTCCG AAAGTGTTTA CCGGCACGAT CCGCGATCTC
CTTAAAACCA CTGATGAGCG GGGGAAACTT CCCGAACTCG TCTCCGCACT CAGGCTGGAT
GCCATTCTCG AACACGAGAT CAACACCTTA AGCGGCGGAG AACTCCAGCG GGTGGCTATT
GCCGCATGCC TTGCACGAAA TGCCGACCTC TACTTCCTCG ATGAGATCAC CCCGTTTTTG
GATATCTACC AGCGTATTTC AGCGGCAAAA CTGATCCGCG AGCTTGCGGC TGAAAAGCCG
GTTGTGATTG TGGAGCACGA CCTCGCTATT CTTGACATGC TTGCTGATAC CGTGCACGTT
GGCTATGGCA AACCGGCAGT CTTTGGTGTC ATCACCCGGC CCAAGGGCGT CCGCGTCGGG
ATCAACCAGT ACCTCGAAGG CTACCTTGCC GAAGAGAATG TGCGGTTCCG GGATTCACAG
GTGGTATTTG AAAAACGGGC ACATGAGAAG GGATCCAAGC GCGAGGATCT TGTCGAGGTC
CCGGCACTCT CAAAAAAATA TGATACTTTT CACCTTACGG TCTCGGGCGG GACCATCCGA
GCTGGCGAAG TTCTTGGTGT CATTGGGGCA AATGGTATGG GAAAGAGTAC CTTTGCAAAA
CTCCTTGCCA GCGTGGAAAA GCCGGACACC GGCAGCATGG ACTCAAAGAT CCGGATCTCC
TACAAGCCAC AGTACATCAA GGCAGATACC ACAGTCTCGG TGGAGATGTA CCTGCGTTCA
TGCACTACCA AATTTGATAG CTCGTATTAC CAGCATGAGA TCCTTGAACC CCTCTCGCTC
CAGTCCATCC TCCAATCCCC CGTTGATACC CTGAGCGGGG GAGAACTCCA GCGAGTGGCT
ATTGCTGCCT GCCTTTCGCG CGATGCCGAC CTCTATATTC TTGACGAACC AAGTGCTCAC
CTTGACGTGG AACAGCGTGT GAAGGTAACA AGGCTCATCA AACGCCATGC AGAGGGAAAA
GCGGTGGCGA TCCTTGTCAT TGACCACGAT ATCTACCTCA TCGATATGAT CAGCGAGCGC
ATCCTTGTCT TTGAGGGCGA ACCCGGCATT GCCGGTACCG CGGCAGGTCC CTTCGAGATG
CGGGACGGCA TGAACCGGTT TTTAAAAGCG CTGGATGTAA CCTTCCGGCG CGATCAGACC
GGCCGGCCCC GGATTAACAA GCCCGACTCC TTCCTGGACA GGGACCAGAA GAGCCGGGGA
GAATACTACT ATTATGCGGC AGAAGACGAA TAG
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| Protein sequence | MRIAIVHKDR CHAKKCGTEC IIYCPRVRTG DETVSIGEDG KALISEELCV GCGICIKKCP
FDAIDIVSLP EELEHPTHRY GKNGFALYGL PIPVQGKVTG ILGANGIGKS TAVKILSGQL
RPNLGSFDSE VAWEEILKRY TGTELFDYLQ TVSKKTKKIA VKPQYIDFIP KVFTGTIRDL
LKTTDERGKL PELVSALRLD AILEHEINTL SGGELQRVAI AACLARNADL YFLDEITPFL
DIYQRISAAK LIRELAAEKP VVIVEHDLAI LDMLADTVHV GYGKPAVFGV ITRPKGVRVG
INQYLEGYLA EENVRFRDSQ VVFEKRAHEK GSKREDLVEV PALSKKYDTF HLTVSGGTIR
AGEVLGVIGA NGMGKSTFAK LLASVEKPDT GSMDSKIRIS YKPQYIKADT TVSVEMYLRS
CTTKFDSSYY QHEILEPLSL QSILQSPVDT LSGGELQRVA IAACLSRDAD LYILDEPSAH
LDVEQRVKVT RLIKRHAEGK AVAILVIDHD IYLIDMISER ILVFEGEPGI AGTAAGPFEM
RDGMNRFLKA LDVTFRRDQT GRPRINKPDS FLDRDQKSRG EYYYYAAEDE
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