| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1314 |
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| Symbol | |
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| ID | 5411959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1339547 |
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| End bp | 1341187 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640868546 |
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| Product | PUA domain-containing protein |
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| Protein accession | YP_001404475 |
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| Protein GI | 154150857 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.188899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGT TCGAGATCAA AAAACGTGAC GGCCTTGCCC GGGCCGGCAT CATGTCTGGG
GATGAGTTGC CAAAGTCCCC GCTTGCGTTC CCTGCCGTGC TCGATACGGC CGCAGTCTTC
CCGGCCCTCT CTTTGCGGAG CGGCACCAGC GTTCCACTCC CTGCACCGCC GGCCTTTGCT
GCGGATTATG TACCAAAAGA TGCGGGCCAG CCGGTCACCA TTCACCCGGC GCTTGATAAC
CCTTCAGTGA GCGGGGACGT GGTGATGGTG GCGGGCTGGC ACACGGCGCT TGCAAACCCC
CGGCAATATG TCCTCTGGCT CAAGGCACTT CGGGATAAAA CCCCTCCCGA CACGCTCTGG
TATGCCCCGG CTGCGGCATT GCCCTCAACC GTCCACATTC TCTGCTACAC GGGGTTTACC
CTCTTTGATT ACACGGGCGT GGATCTCAAA TCCGCGCAGG GGCTTTTCTG CACTCCCGAA
GGCGAATTTC CCGCGGACGC ACAGGCCGCC GGCCTCTGCG GATGTGAAGG CTGCCGGAAC
GGCGACCTTG CGCTGCACAA CCGGCTCGCA CTGGAGCACG AGGTGGCTCT TGCCCGGTAC
TTTACCGGGC TGCAGAAGCT CCGCGAACTT GTGGAGGCCA GGTGCCGGAT GAACGCAAAT
TCTGTTGCTA TCATGCGTCA CCTTGACCAG GATTATACCT GGTCCGAACC CTTCTCCCCG
GTTGCACGCA GCGGTGTCAT GCGGGCAAAC TCCGGCGAGT CCATGCAGCG GGTGGAGGTC
CGGCGCTTTG CAGAACGCCT CCTTTCACGC TATAAGCCTC CGAAAGCTAC TGTGGCCGTT
CTCCTGCCCT GCTCGGCGAA AAAACCCTAC TCGCTCTCCC AGAGCCACCG CCGGTTCCAG
ATGGCGATAG CAGGGCGTGC ACACGAACTC ATTGTCACCT CCCCGCTCGG CCTTGTCCCC
CGGGAGCTTG AGTGCGTGTA CCCGGCCATG CACTACGATG TTCCGGTCAC CGGCTACTGG
GATGCAGAGG AGTGTGCATA CATCGCGGAC ATCCTTGCCC GCTACCTTGC GCTCCATTCC
TACGAGCGCG TGATAGCCCA CCTTGAAGGC GGGGCGCTCA AAGTGGCGGA GATGGCAGCG
GAACAGTGCG GGATCACGCT TGAATATTCC TGCCGGGACC ACCCTACCGG GGAAGAGGCT
CTTACCCGGC TCAGCCATGC CCTGGACTGC GAGCGCCGGG TCAAGGACGA CCGGCTCCAC
GGCATGCTCT CGTACCAATT CGGGAGTGAT ATAGATACCA AAGGCATGCT CTCCCGTGGC
CACTTCCCGG AGATCTTTTA TTCAAGGAAC AACCAGCAGC TCTTCTCCAT TGACACCGGT
ACCGGCCTTC TCCGCCCCAC ATTCGAAGGC TGGGGCCTTG TCCCGGAGGG CTACCGCGTG
ACCATCAGCG ACTTCCTTCC TGAAGGGGAC GTGCTTGTCC CGGGCATTGT GGAGGCCGAT
CCCGCCATCC GTGAAGGGGA CGAAGTGCTC GTGGTGGGGT CAAAGGCCCT GGCCACGGGA
AGAGCCGCTA TGACGGGTGC GGAGATGAAA GGATCGAAGC GCGGTGTTGC CGTCCGGGTG
CGTAAAGTAA AGAAGTTGTA G
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| Protein sequence | MIRFEIKKRD GLARAGIMSG DELPKSPLAF PAVLDTAAVF PALSLRSGTS VPLPAPPAFA
ADYVPKDAGQ PVTIHPALDN PSVSGDVVMV AGWHTALANP RQYVLWLKAL RDKTPPDTLW
YAPAAALPST VHILCYTGFT LFDYTGVDLK SAQGLFCTPE GEFPADAQAA GLCGCEGCRN
GDLALHNRLA LEHEVALARY FTGLQKLREL VEARCRMNAN SVAIMRHLDQ DYTWSEPFSP
VARSGVMRAN SGESMQRVEV RRFAERLLSR YKPPKATVAV LLPCSAKKPY SLSQSHRRFQ
MAIAGRAHEL IVTSPLGLVP RELECVYPAM HYDVPVTGYW DAEECAYIAD ILARYLALHS
YERVIAHLEG GALKVAEMAA EQCGITLEYS CRDHPTGEEA LTRLSHALDC ERRVKDDRLH
GMLSYQFGSD IDTKGMLSRG HFPEIFYSRN NQQLFSIDTG TGLLRPTFEG WGLVPEGYRV
TISDFLPEGD VLVPGIVEAD PAIREGDEVL VVGSKALATG RAAMTGAEMK GSKRGVAVRV
RKVKKL
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