| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1300 |
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| Symbol | |
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| ID | 5412058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1321624 |
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| End bp | 1322655 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868530 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001404461 |
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| Protein GI | 154150843 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.987941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00895683 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGATA ACCTGCTTTT TGCCATCGCA ACCATTATTG CCGGTGTTGT GGTGGCAATC
ATCGCACGGA TTATCGTGCG GTGGCTGGAG AAGTTTGCCG AAACCACCGA GACCAAGTGG
GACGATATTA TCGTCGCCGC AATAGGTACC CCGGTCCAGA TCGGTATCAT CGCGTTTTCC
CTTTACATTG CCCTGAAATA TTATGACATC GTGCCGGCCC AGTACGCCTG GATCCTCTCC
GGTAAGGTTC TCGATTCGAT CTACATCCTG CTCGGGACCT GGATCGCTGC ATCCCTCCTC
CACGATATTG TCCGGATCTA TGGGCGGCAG ATTGCCGAGT CAACCGAAGG GGACATGGAT
GATCGTATTG TCGACCTTCT CGAACTTGCC GTGCGCTACG TGGTCTGGTT TGCCGGGATC
ATGCTTGTCA TGGTCAACCT GGAGATCAAC ATTACTCCCT TCCTTGCCGG TGCGGGTATC
GCAGGTATTG CCCTTGCGCT CGCTGCACAG GACCTGATCT CCAACTTTTT TGGCGGGGCC
ATTATCACGG TGGACAAGCC CTTCAAGGTG AGCGACCGGA TCGAGGTTGA TACCTATTAT
GGCGATGTGC TCGTGATCGG GACGCGGAGC ACACGGCTCC GGACCCTTGA CGGGAAGATC
GTCACCCTCC CAAACAATAA GATCACCACC AACAGCGTCG TGAACTTTTC CGAACCGGAT
CCCCGGATCC GGTACACCAT CCCCATTACT GTGGCGTACG GAAGCGATAT TTCCCGGGTC
AAACAGGTTC TTCTTGAAGT CGCAAACGAT GCAATAAAAA ATACGGATTT TTTTGATAAG
GATCAGGTCC CGAAAGTGTT TTTTCAGGAG TTTGGGGATT CGGCCCTCAA TTTTATTATT
TATGTCTGGG CAAAAGCCTA CAATGTCTCT GATGAGGCAA AAGATGAGAT CAACACCCGG
ATCGCGGCAC GATTCGCGGC AGAGGGAATC GAGATCCCGT TCCCGCAGAT CGATGTGCAT
GTGAGGAAAT AA
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| Protein sequence | MNDNLLFAIA TIIAGVVVAI IARIIVRWLE KFAETTETKW DDIIVAAIGT PVQIGIIAFS
LYIALKYYDI VPAQYAWILS GKVLDSIYIL LGTWIAASLL HDIVRIYGRQ IAESTEGDMD
DRIVDLLELA VRYVVWFAGI MLVMVNLEIN ITPFLAGAGI AGIALALAAQ DLISNFFGGA
IITVDKPFKV SDRIEVDTYY GDVLVIGTRS TRLRTLDGKI VTLPNNKITT NSVVNFSEPD
PRIRYTIPIT VAYGSDISRV KQVLLEVAND AIKNTDFFDK DQVPKVFFQE FGDSALNFII
YVWAKAYNVS DEAKDEINTR IAARFAAEGI EIPFPQIDVH VRK
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